Paraburkholderia megapolitana: FNZ07_27455
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Entry
FNZ07_27455 CDS
T06515
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FNZ07_27455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeg03019
]
FNZ07_27455
03009 Ribosome biogenesis [BR:
pmeg03009
]
FNZ07_27455
03036 Chromosome and associated proteins [BR:
pmeg03036
]
FNZ07_27455
Enzymes [BR:
pmeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FNZ07_27455
Messenger RNA biogenesis [BR:
pmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNZ07_27455
Ribosome biogenesis [BR:
pmeg03009
]
Eukaryotic type
90S particles
RNase
FNZ07_27455
Prokaryotic type
rRNA processing factors
FNZ07_27455
Chromosome and associated proteins [BR:
pmeg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FNZ07_27455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QDQ84796
LinkDB
All DBs
Position
2:complement(3189030..3190301)
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AA seq
423 aa
AA seq
DB search
MPSSQLESRLRYEFRNAELLRQALTHRSHSATHNERLEFLGDSVLNCAVAALLFQRFSKL
DEGDLSRVRANLVKQQSLYEIAQALNISDELRLGEGELRSGGFRRPSILADTLEAILGAI
FLDGGFEAAQTVIKRLYVPILDHIDPRTLGKDSKTLLQEYLQGHKLPLPTYTVVATHGAA
HNQQFEVECTVPKLDVKVSGSGASRRAAEQAAAKKALDEVMAAAPAVVAKPRRSKGARTA
KHAEPEIVPGVTGVQTALDLRAPDRKSERAARSEPKPVAVETTAERPVPAQAAPAPAPAP
LAVIRAAHVEYSQAPSADKDKTERPDREKAERADKTDNAAKTDNAVAVRALEKSPEKATE
KATDKTTEKADAALRGVDKPVAHRNGRDPAQDAPAESAAAETAAALEPGPADVPLPRVAD
AGH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgccctcatctcagttggaaagccgtttgcgctacgaatttcgcaatgcggaattgttg
cgccaggctttgacacaccgcagtcacagtgccacgcataacgaacggctcgaatttctc
ggcgattccgttctgaattgcgcggtagccgcacttttgttccagcgtttcagcaaactg
gacgaaggcgatctgtcacgtgtccgcgccaacctggtcaaacagcagtcgctgtacgaa
atagctcaggccctcaatatttccgacgaattgcggctcggcgagggcgaattgcgtagc
ggcggcttccgccgtccgtctatccttgctgacacgctcgaggcgattcttggggcgatc
ttcctcgatggcggttttgaggccgcacagacggtgatcaagcgcctgtatgtgccgatc
ctcgatcacatcgatccccgcacgctgggcaaggattccaagacactgctgcaggagtat
ctgcagggtcacaagctgccgttgcccacgtataccgtggttgcgacgcatggtgcggcg
cacaatcagcagttcgaggtcgagtgtacggtgcccaagctggatgtgaaggtgtcggga
tcgggcgcgagccgccgggctgccgagcaggctgcggccaaaaaagcgctcgacgaggtg
atggctgccgcgccggccgtggtggcgaagccgcggcgctcgaagggggcgcgaacggcg
aaacatgccgagccggagatcgttccaggcgtgactggcgtgcaaacggcactcgatctg
cgtgcacccgatcgcaagagcgagcgggcggcgcgcagcgagccgaagccggtggcggtc
gaaactaccgctgagcggcccgttcccgcacaggcagcgccggccccggctccagcaccg
ctggccgtgatccgcgctgcgcacgtcgaatatagccaggcaccgtcggcggataaggac
aaaaccgagcgcccggaccgcgaaaaggccgagcgtgcggacaagacagacaacgccgcc
aaaacagacaacgcggtcgccgtccgcgcgctcgaaaagtcgccggaaaaagccaccgaa
aaagccactgataaaactaccgagaaggccgacgcagcactccgcggcgtcgacaagccg
gtagcgcatcgcaatggccgcgacccggcccaggacgcaccggcggagtccgccgccgct
gaaaccgcagccgcactcgaacccggtcccgccgacgtgccgctgccgcgcgtcgccgat
gccggccattga
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