Paraburkholderia megapolitana: FNZ07_27805
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Entry
FNZ07_27805 CDS
T06515
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FNZ07_27805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeg03019
]
FNZ07_27805
03009 Ribosome biogenesis [BR:
pmeg03009
]
FNZ07_27805
Messenger RNA biogenesis [BR:
pmeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FNZ07_27805
Ribosome biogenesis [BR:
pmeg03009
]
Eukaryotic type
Pre-60S particles
RNases
FNZ07_27805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Ribosomal_L10
Motif
Other DBs
NCBI-ProteinID:
QDQ84855
LinkDB
All DBs
Position
2:complement(3257494..3258129)
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AA seq
211 aa
AA seq
DB search
MTDTLDPAGTSNAPDAPALVRSDMNLVWLDMEMTGLEPDTDRIIEIAVVVTNSHLDKLIE
GPVLAIHQSDETLAKMDQWNQNTHGRSGLIDRVRASTVTEADAVEQIRTFLGAHVPPGKS
PMCGNSICQDRRFMARWMPDLERFFHYRNLDVSTLKELCRRWQPATYKGFQKRAMHTALA
DIHESIDELRYYREHFLVSAASVPIADTSAT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccctcgatcctgccggcacttccaacgctcccgacgctcccgcgctcgtg
cgcagcgacatgaatctcgtctggctcgacatggaaatgacggggctcgaacccgacacc
gatcgcatcatcgagatcgccgtcgtggtgacgaattcgcacctggacaagctcatcgag
ggtcctgtgctggccattcaccagagcgacgaaacgcttgccaaaatggaccagtggaac
cagaacacgcatggccgctcggggctgatcgaccgggtgcgcgcgtcgacggtgacggag
gcggatgccgtcgagcagatccgcacgtttctcggcgcccatgtgccgccgggcaaatcg
ccgatgtgcggcaactcgatctgccaggaccgccgcttcatggcccgctggatgccggac
ctcgagcggtttttccattaccgcaatctcgacgtcagcacgctgaaggaactgtgccgc
cgctggcaaccggccacgtacaagggcttccagaagcgtgcgatgcacacggcgctcgcc
gacatccacgaatcgatcgacgaactgcgctactaccgcgagcattttctggtgtcggca
gcaagcgtaccaatcgccgatacatcagcaacgtag
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