Paraburkholderia megapolitana: FNZ07_28320
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Entry
FNZ07_28320 CDS
T06515
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmeg
Paraburkholderia megapolitana
Pathway
pmeg03030
DNA replication
pmeg03430
Mismatch repair
pmeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNZ07_28320
03430 Mismatch repair
FNZ07_28320
03440 Homologous recombination
FNZ07_28320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeg03032
]
FNZ07_28320
03400 DNA repair and recombination proteins [BR:
pmeg03400
]
FNZ07_28320
Enzymes [BR:
pmeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNZ07_28320
DNA replication proteins [BR:
pmeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNZ07_28320
DNA repair and recombination proteins [BR:
pmeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNZ07_28320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QDQ84948
LinkDB
All DBs
Position
2:complement(3372957..3374114)
Genome browser
AA seq
385 aa
AA seq
DB search
MPEQLLPDPAIDTPIVFVDLETTGGSPGEHRITEVGVVELGASGVSRWSTLVDPQQPIPP
FIQQLTGITNAMVQGAPTFDAIAAALFERLNGKLFVAHNASFDRGFLRSEFARAGFTFNP
DVLCTVRLSRALFPAEKRHGLDALMARHALVPTDRHRALADADLLWQFWQRLHGLVPLDV
LRTQIERTMRRYRLAGDITEDLLDSAPAGCGVYALYGEDDAPLYVGRSVRVRQRLRTHLT
GERRSSKDMRLAQQVRRVEWRATGGELGALLAEAQWIAALRPVHNRLPRVARDDPADAPW
PYTGAIVFEERDDASRSRTFHVVDRWRYVGHAPSLEEAALLTSSGIAGPFELSTYRILQT
HLARGLRVTPLAAPLSALAGADTVA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacagcttctgccggaccccgcgatcgacacgccgatcgtcttcgtcgacctc
gaaacgaccggcggctcgccgggcgagcaccgcatcaccgaggtcggcgtggtcgaactg
ggggcgtcgggcgtttcgcgctggagcacgctggtcgatccgcagcagccgattccaccg
ttcatccagcaattgaccggcatcaccaatgcgatggtgcagggcgcacccacgttcgat
gcgatcgctgccgccctgttcgagcgcctgaacggcaagcttttcgtcgcgcacaacgcc
agcttcgaccgcggttttttgcgcagcgagttcgcgcgcgcaggtttcacgttcaatccc
gatgtgctgtgtaccgttcgtctgtcgcgcgcgctgtttccggcggaaaagcgccacggg
ctcgacgccttgatggcgcggcatgccctggtacccaccgatcgacatcgcgcgctcgcc
gacgccgatctgctatggcagttctggcaacgcctgcatgggctggtgccgctcgacgtg
ttgcgcacgcagatcgagcgcacgatgcggcgctaccggctggccggcgacattaccgaa
gatctgctcgatagcgcgccggccggttgcggtgtctacgcgctctacggcgaggacgat
gcgccgctgtacgtcggccgcagcgtacgcgtgcggcagcgcttgcgtacgcatctgacc
ggcgagcgccggtcatcgaaagacatgcggcttgcgcagcaggtgcggcgagtggaatgg
cgcgcaacgggcggcgaactcggcgcgctgcttgccgaggcgcagtggatagcagcgctg
cgtcccgtccataaccggctgccccgtgtggcccgcgacgatcccgccgatgcgccatgg
ccgtacacaggcgcgatcgtcttcgaggagcgcgacgacgcgtcgcgctcgcgcactttc
catgtggtggaccgctggcgttatgtgggccatgcgccgtcgctcgaggaagcagcgctg
ctgacgtcgtccggcattgcgggtccgttcgagctctcgacgtaccggattctgcagacg
caccttgcgcgcggcctgcgcgtcacgccgcttgctgcgcctttgtcggcgctggctggt
gcggataccgtcgcatag
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