Paracoccus methylovorus: JWJ88_00085
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Entry
JWJ88_00085 CDS
T08684
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pmeh
Paracoccus methylovorus
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_00085 (addA)
Enzymes [BR:
pmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWJ88_00085 (addA)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JWJ88_00085 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QRZ13095
LinkDB
All DBs
Position
1:13868..17245
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AA seq
1125 aa
AA seq
DB search
MMDEATLAQVRAADPHRSTWLTANAGSGKTRVLTDRVARLLLAGIAPERILCLTYTKAAA
TEMQNRLLARLGKWAMLPEPELRAELARLGEAGAPDLPAARRLFARAIETPGGLKVQTIH
SFCAGVLRRFPIEAGVPHGFTELDDRSAALIRAEIIEEMARDQAPELEDLLALHSGENLD
AFLAGLRGFEAPADRDALWTACGLAPGGDMQALLAECFADGAGVIPALIPHLLKSGTNDQ
KAAARLAPGNWAQPGLAELAILESVLLTGASAKAPFTAKYDSFPAKALRSGPCADLLDDL
GILMERVGAARPRRLALSHAERTLALHRFGHGFLNRYRAQKAAHGFLDFDDLIDRTARLL
SENSMAQWVLFRLDGGIDHILVDEAQDTSPAQWQVIERLTDEFTSGQGARTNARSLFVVG
DPKQSIYSFQGADIAVFEARRAGFAAAFQAVQEPMQVLELRHSFRSSTVILTLVDQVFAG
DAARGLGDPPQHRAFRAEMPGRVDLWPAIPKPDKPEPGDWTDPVDQPAENSETVQLARAI
AEAIGRMLSQPIFDAKTGKVRKIRAGDVLILVQRRSELFAEIIAALKAANLPVAGADRLK
LAGEMAVRDIRAVLSVLATPEDDLSLASALRSPLFGLSEEELFRLASGRRRGEYLWRRLR
ESSHRHAVELLADLMGQTGFMRPYDLIQRLLIRHGGRERLVARLGPEAEDGIDELLSQAL
SYESSETPSLTGFLVWLTGDDVEVRRQPGSPGEHGEGLIRVMTVHGSKGLESPIVIMPDT
AKRKPPREGQVLPGPGGMALWRGKKGERPDPVEELAADQTERQLQERKRLLYVGLTRAES
WLIVAAAGETGEGEDSWHAMVEAGMGRSDLTQTLLPGPWGGDIRRLEFGVWPATAPDTMR
MAKPALAEPDWLRAPPPPAPEKVRPVAATALGGAKVIGAMGEGDAEAAMLFGTRLHLLLE
HLPGRDPADWPDLARDVLADAEGGMPAPDELAALLAEAHAVIEAPDLAEIFALPEGAEVL
AEVALAAPIPGIGILSGTVDRLVVGPGRILAVDYKSNREVPDAPAAVPLGILRQMAAYRA
ALRLIWPGEPVEVAVLWTAARSMMALPDDLLDRVMAGLDPNGRGA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgaggccacccttgcgcaggtgcgggcggccgacccgcatcgctcgacctgg
ctgacggccaatgccggctcgggcaagacgcgggtgctgacagaccgggtggcgcggctt
ctgctggccggaatcgcgcccgagcgtatcctgtgcctgacctataccaaggcggctgcg
accgagatgcagaaccgcctgctggcgcggttgggcaaatgggccatgctgcccgagccc
gaactgcgcgcggaactggcgcggctgggcgaggcgggtgcgcccgacctgcccgccgcg
cgccggcttttcgcacgcgccatcgagacgccgggcggtctcaaggtccagaccatccac
agcttttgcgccggcgtcctgcgtcgtttcccgatcgaggccggcgtcccgcatggcttt
accgaacttgacgaccgcagcgccgcgctgatccgcgccgagatcatcgaggaaatggcc
cgcgaccaagcgcccgagctggaagacctgctggcgctgcattcgggcgaaaacctcgac
gctttcctggccggtctgcgggggttcgaggcccccgcggaccgggacgcgctgtggacc
gcctgcggtctggcgccgggcggggatatgcaggcgctcttggccgaatgttttgccgat
ggcgcgggcgtcattccggcgctgatcccgcacctgctgaaaagcgggacgaacgatcag
aaggcggcggcaaggcttgcccccggcaactgggcgcagccgggactggcggaacttgcg
atccttgaatccgtcctgctgactggggccagcgcgaaggcgccatttaccgcgaaatac
gacagcttcccggccaaggcgctgcgcagcggtccttgcgcggacctgctggacgacctc
ggcatcctgatggagcgggtcggggcggcgcgcccccgtcgcctcgcgctgtcgcatgcc
gaaaggacgctggcgctgcatcggttcggccatggtttcctgaaccgctaccgtgcgcaa
aaggcggcgcatggatttctggatttcgacgatctgatcgaccggaccgcgcggcttttg
tcggaaaacagcatggcgcaatgggtgctgttccgtctggatggtggcatcgaccacata
ttggtcgatgaggcacaggacaccagccccgcccaatggcaggtgatcgaacggttgacc
gacgagttcacctctgggcaaggggcgcggacgaatgcgcgcagcctgtttgtcgtgggc
gaccccaagcagtcgatctattccttccagggtgccgacatcgccgtgttcgaggcccgc
cgggccggtttcgccgccgccttccaggcggtgcaagagccgatgcaggtgctggagttg
cggcattcgtttcgcagctcgaccgtgatcctgacgctggtcgatcaggtctttgccggc
gatgcggcgcgtggtcttggcgatccgccgcagcatcgcgcctttcgcgccgagatgccc
ggccgcgtcgatctgtggcccgcgatcccaaagcccgacaagcccgagccgggcgactgg
accgatccggtggatcagcctgccgagaactcggaaaccgtccagcttgcccgcgccatt
gccgaggccatcgggcggatgctgagccagccgatctttgacgccaagaccggcaaggtg
cgcaagatccgcgccggcgacgtgttgatccttgtccagcgccggtcggaactttttgcc
gagatcatcgccgcattgaaggctgcgaacctgcccgttgcgggcgccgaccgcctgaaa
ctggctggagagatggccgtgcgcgatatccgcgccgtgctgtcggttctggccaccccc
gaggacgatctgtcgcttgcctcggcgctgcgctcgccgctgttcgggctaagcgaggag
gagcttttccgcctcgcctccggtcgtcggcgcggcgaatacctgtggcgacggctgcgt
gaatcgtcccatcgccacgcggtcgagttgctggccgacctgatgggccagaccggcttc
atgcgcccctatgacctgatccagcgcctgctgatccggcatggcgggcgcgaacgcctg
gtcgcccggcttggtcccgaagccgaggatggcatcgacgagttgttgtcgcaggcgttg
agctatgaaagctcggaaaccccttcgctgaccggtttccttgtctggctgaccggcgac
gatgtcgaggttcgtcgccagccgggcagccccggcgaacatggcgaggggctgatccgg
gtgatgaccgtgcatggctccaagggtctggaaagccccatcgtcatcatgcccgacacc
gccaagcgcaagccgcctcgcgaggggcaggtgctgcccggcccgggcggcatggcgctg
tggcgcggcaaaaagggcgagcggcccgacccggtcgaggaactggccgcagaccagacc
gaacggcagctacaggaacgcaagcggctgctctatgtcggcctgacgcgggccgaaagc
tggttgatcgtcgccgcggcgggtgaaaccggcgagggcgaggatagctggcatgcgatg
gtcgaggcgggcatgggacgctcggacctgacccagacgcttttgcccgggccttggggc
ggcgacatccgacggctggaatttggcgtctggccagcaaccgcgccggatacgatgcgg
atggcaaagcctgccttggccgagccggactggctgcgtgcgcccccgccccccgcgccg
gagaaggtgcgtcctgtcgcggccacggctttgggcggcgccaaggtgatcggtgcgatg
ggtgaaggcgatgctgaggcggcgatgctgttcggcacccggttgcatctgctgctggaa
catttgccgggccgcgatcctgccgactggccggatcttgcccgcgatgtgctggccgat
gccgaaggcggtatgcccgcccccgatgagttggccgcgctgctggccgaggcgcatgcg
gtgatcgaagcccccgatctggccgagatattcgctttgcccgaaggcgctgaggtgttg
gccgaggttgctctggccgcgccgatccccggcatcgggatcttgtcggggacggtggac
cggctggtggtcgggccggggcgcattctggcggtggattacaaatccaaccgcgaggtg
cctgatgcccccgctgctgttccgctggggattttgcggcagatggcggcctatcgcgcg
gcgctgcggctgatctggcccggtgagccggtcgaggtcgcggtgctttggaccgcggcg
cgcagcatgatggcgctgcctgatgacctgttggatcgggtcatggcgggccttgacccc
aacggtcgcggtgcctag
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integrated database retrieval system
