Paracoccus methylovorus: JWJ88_00745
Help
Entry
JWJ88_00745 CDS
T08684
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWJ88_00745 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeh03019
]
JWJ88_00745 (recQ)
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_00745 (recQ)
Enzymes [BR:
pmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWJ88_00745 (recQ)
Messenger RNA biogenesis [BR:
pmeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JWJ88_00745 (recQ)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWJ88_00745 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QRZ13223
LinkDB
All DBs
Position
1:155221..157254
Genome browser
AA seq
677 aa
AA seq
DB search
MSAAPLLRQVFGFDAFRPGQEEIVDAVAAGRDVLAIMPTGGGKSLCYQLPALIRDGLTVV
ISPLIALMRDQVRALTEAGVAAAALTSGNSEDENAEVMRALNARELRLLYMAPERLVSGA
TVPMLRRAGVQAIAVDEAHCVSQWGHDFRPDYLRVGELRRALRVPLAAFTATADAETRDE
IVARLFDGTQPQIFLRGFDRPNIHLAFQPKDGPRRQILDFAAARRGQSGIVYCGTRAKTE
ALAAALNQSGLAATAYHGGMEGEARREVEARFQREDGLIVVATVAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRGGRDGAPAETLTLYGPDDIRLRRGQIDEGLAPPERKAADHARLN
ALLGLAEATGCRRVALLGYFGETAVPCGNCDICDAPPECFDATEAVQKVLSAILRTGQTY
GAGHVIDVLTGTMTDRIGQRGHDRLPTFGVGRDLSKPQWQAVVRQMLGRDLIRPDPERHG
GLAITAAAHPVLRGEERITLRRDLVSRARPAVVVRASVDEEDAPLLSALKAKRRALAEAA
RVPAYVIFPDRTLIEMAQTRPGTLDEMARVNGVGAKKLESYGEEFLRVIAGEVTPMHPAR
RALAGRAAGDLFDRLAEVQSRLARGEDGTEKPLSVSSSALRRIAQDRPRDLSRYLDEPRF
HRFGAAFTAEIADDSEA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccgccccccttctgcggcaggtcttcggcttcgacgcctttcggccggggcag
gaagagatcgtggatgccgtcgcggccggccgcgacgtgctggcgatcatgccgaccggc
ggcggcaagtcgctgtgctatcaactgcccgcactgatacgggacgggctgacggtggtg
atttcgccgctgatcgccctgatgcgcgatcaggtccgtgcattgaccgaagcgggcgtc
gctgccgccgccctgaccagcggcaattccgaggacgagaacgccgaggtgatgcgggcg
ctgaatgcgcgcgaactgcgactgctttacatggcgcccgagcggctggtgtccggggcg
accgtgccgatgctgcgccgcgccggggtgcaggccatcgccgtggacgaggcgcattgc
gtcagccagtgggggcatgacttccgccccgattatctgcgggttggcgagttgcgccgg
gcgctgcgcgtgcccttggccgcctttaccgccaccgccgatgccgagacccgcgacgag
atcgtggcgcggctgttcgacggcacgcaaccacagatattcctgcgcggctttgatcgg
ccgaatatccatctggccttccagcccaaggacggaccgcgccggcagatcctcgatttc
gccgccgcccggcgcggacagtcgggcatcgtctattgcggcacccgcgccaagaccgag
gcattggcagccgcgctgaaccagtcgggtctggccgcgaccgcctatcatggcggtatg
gagggtgaggcccgccgcgaggtcgaggcgcggttccagcgcgaggatgggctgatcgtg
gtggccacggtcgcttttggcatgggcatcgacaagcccgacattcgctgggtcgcgcat
gcggacctgcccaagtcgatcgaggcctattatcaagagatcggccgtggcggccgcgat
ggtgcccctgccgagacgctgacgctttacggccccgacgacatccgcttgcgtcggggg
cagatcgacgaggggctggccccgcccgaacgcaaggccgctgatcatgcccggctgaat
gcgctgctggggctggccgaggcgaccggatgccggcgcgtcgctttgctgggctatttc
ggggaaaccgctgtgccctgcgggaattgcgacatctgcgacgctccgcccgagtgtttc
gacgcgacagaggcggtgcaaaaggtgctttcggccattctgcgcaccggccagacctat
ggcgcgggtcatgtgatcgacgtgctgaccggcaccatgaccgaccgtatcggtcagcgc
ggccatgatcggctgccgacatttggtgtcggtcgcgacctgtcgaagccgcaatggcag
gcggtcgttcgccagatgctgggccgcgacctgatccgccccgaccccgagcgccatggc
gggttggccattaccgccgccgcccatcccgtgctgcgcggggaagagcgtatcacgctg
cgccgtgatctggtcagtcgtgcccggcctgccgtggtcgtccgcgcctcggtcgatgaa
gaggacgcgccgctgctttcggcccttaaggccaagcgccgggcgctggccgaggcggcg
cgcgtgccggcctatgtgatctttcccgaccgcaccctgatcgagatggcccagacccgc
ccgggcacgctggacgagatggcgcgcgtgaatggcgttggtgcgaaaaagctggaaagc
tatggcgaggaattcctgcgcgtcatcgccggcgaggtgacgcccatgcaccctgcccgt
cgcgccttggccgggcgggccgcaggggacctgttcgaccgtctggccgaggtgcagagc
cgtctggcccggggcgaggacgggaccgagaagccgctttccgtcagcagttcagccctg
cgccgtatcgcgcaggatcggccccgggacctgtcacgctatctggatgagcctcggttt
caccggttcggcgcggcctttaccgccgagatcgcagacgactccgaggcctga
DBGET
integrated database retrieval system
