Paracoccus methylovorus: JWJ88_04165
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Entry
JWJ88_04165 CDS
T08684
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03030
DNA replication
pmeh03410
Base excision repair
pmeh03420
Nucleotide excision repair
pmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWJ88_04165 (polA)
03410 Base excision repair
JWJ88_04165 (polA)
03420 Nucleotide excision repair
JWJ88_04165 (polA)
03440 Homologous recombination
JWJ88_04165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeh03032
]
JWJ88_04165 (polA)
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_04165 (polA)
Enzymes [BR:
pmeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWJ88_04165 (polA)
DNA replication proteins [BR:
pmeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JWJ88_04165 (polA)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JWJ88_04165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWJ88_04165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QRZ13863
LinkDB
All DBs
Position
1:818650..821469
Genome browser
AA seq
939 aa
AA seq
DB search
MTEAFGKGHHLHLIDGSAFIFRAYHALPPLTRRSDGLPIGAVAGFCNMVWKYLQDGKGSD
QPTHAAVIFDHSSKTFRNDIYPLYKANRPEPPEDLRPQFPLTREATRAFSIACIETEGFE
ADDIIASLACQARDAGGRVTIISSDKDLMQLVGDGVQMMDPIKGKPIGPEEVREKFGVGP
ERVVDVQALAGDSIDNVPGAPGIGIKTAAQLIGEYGDLETLLARAGEIKQPKRRQTLIDH
AEQIRISRRLVELDCRMVLDFGLETLSIREPEPEALMEFLTRMELRTLTKRVAERFGTEA
PTVAEAAPGPTAAAGDAASSVAELPAIDRSLYVTIRDEAVLAEWLAEIGEKGIVAIDTET
TGLDEMQAELVGISLCTGPGRAAYLPLGHVDGTADLFASGARSGGQMDLERALAMLRPVL
EDPSVLKIGQNVKYDWKILARHGIRMAPLDDTMLLSYALNAGAHNHGMDELADLYLGHRC
LPIKDLIGSGKAQINFSQVPIDRASEYAAEDAEVTWRLWYHLRPKLSPNHVTTAYERLER
PMIGVLADMEMAGVRIDSEHLKRMSNAFAQKMAGLEAEIHALAGGSFNVGSPKQLGEILF
ERMGLAGGKQGKTGAFSTSAEVLEDLAAEGHELPARVLDWRAISKMKSTYTDALPLHVNP
ETGRVHTCYSIAGAQTGRLASTDPNLQNIPVRTDEGRRIREAFVAGPGMRFVSLDYSQIE
LRILAHVAQIPALKQAFRDGIDIHAMTASQMFGVPVEGMDPMIRRRAKAINFGVIYGISG
FGLARNLRIPRAEAQAFIDTYFERFPEIRAYMDRTVAEAKQDGFVRTLFGRRIMTPGINQ
SGPAAGGARRAAINAPIQGAAADIIRRAMIRMPDAIRDLPARMLLQVHDELVFEVEEGAV
PDLIEAARAVMQGAADPAVKLDVPLIVDAGHGLNWAEAH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggcattcggcaagggccaccacctgcatctgatcgacggatcggcctttatc
tttcgcgcctatcacgccctgccgccgctgacccggcgttccgacgggctgcccatcggg
gcggtggcgggcttttgcaacatggtgtggaagtatttgcaggacggcaagggatcggat
cagccgacgcatgcggcggtgatctttgaccattcctcaaagacgtttcgcaatgacatc
tatccgctttacaaggccaaccgtcccgagccgcccgaagatctgcggccgcagttccca
ctgacacgcgaggcgacgcgcgccttcagcattgcctgcatcgagaccgaggggttcgag
gccgacgacattattgcctcgttggcctgtcaggcgcgggatgcaggcgggcgcgtgacg
atcatcagctcggacaaagatctgatgcagttggtcggtgatggtgttcagatgatggat
ccgatcaagggcaagcccataggtcccgaggaggtgcgcgagaaattcggtgtcggcccc
gaacgggtggttgatgtgcaggcgctggccggcgattctatcgacaatgtgccgggcgcg
cctggaatcgggatcaagacggctgcgcagcttatcggggaatacggcgatctagagacc
ctgttggcgcgggccggagaaatcaaacagcccaagcgtcgccagaccctgatcgaccat
gccgagcagatccgcatctctaggcggctggtcgaactggactgccggatggtgctggat
ttcgggttggagactctgtcgatccgcgagcccgagccggaggcgttgatggaattcctg
acgcggatggaattgcgcacgctgaccaaacgcgtggccgagcgtttcgggaccgaggct
ccgaccgtggccgaggcggcgcccgggccaactgccgctgccggggatgcggcttcgtcg
gtcgctgaactgccggcgatcgaccgcagcctttatgtgacgattcgcgatgaggctgtc
ctggccgaatggctggctgagattggcgaaaagggtattgtcgccatcgataccgaaacc
acgggcctggacgagatgcaggccgaactggtcgggatttcgctttgcaccgggcccggt
cgcgcggcctatctgccgctgggccatgtggacggtacggcggatctgttcgcctcaggt
gcgcgctcgggcggacagatggatctggagcgggcgctggccatgctgcggccggtgctg
gaggatccgtcggtgctgaagatcggccagaacgtcaaatatgactggaaaattctggcc
cgtcatggcatccgcatggcacccttggacgatacgatgctgctgtcctatgcgctgaac
gcgggggcgcacaaccatggcatggatgaactggcggacctgtacctgggtcatcgctgc
ctgccgatcaaggatctgatcggttcgggcaaggcacagatcaatttctcgcaggtgccg
atcgaccgggccagcgagtatgccgccgaggacgccgaggtgacctggcggctttggtac
catctgcgtccgaaactgtcgcccaaccatgtcaccacagcctatgaacggttggaacgg
ccgatgatcggggttctggccgatatggagatggccggcgtccgcatcgattccgaacat
ctcaagcgcatgtccaatgcctttgcccaaaagatggccgggctggaggccgagatacac
gccttggccggcgggtcgttcaacgtgggcagccccaagcaactgggcgagatcctgttc
gagcgcatgggccttgccggcggcaagcagggcaagaccggcgctttttcgacaagcgcc
gaagtgttggaggatctggccgccgaggggcacgaactgccggcacgggtgctggactgg
cgggcgatttccaagatgaaatcgacctataccgatgcgcttcccttgcatgtgaacccc
gagacggggcgggtgcatacctgttattccatcgccggtgcgcagacagggcggctggcc
tcgactgatccgaacctgcagaatattcccgtgcggaccgacgaggggcggcgcattcgc
gaagcctttgtcgccgggccggggatgcgatttgtgagccttgactatagccagatcgag
ctgcggatccttgcgcatgtggcgcagatcccggcgctgaagcaggcttttcgcgacgga
atcgacattcacgccatgactgccagccagatgtttggcgtgccggtcgaggggatggac
ccgatgatccggcgtcgggccaaggcgatcaatttcggggtgatctatgggatttccggc
tttggcctggcgcgcaacctgcgcattcctcgtgcagaggcgcaggcatttatcgacaca
tattttgagcgttttcccgagatccgagcctatatggaccgcaccgtcgccgaggcaaag
caggacgggttcgtacgcacattgtttggccggcggatcatgacgccggggatcaaccaa
tcaggtccggcggccggtggggcgcgacgggcggcaatcaacgcgcccatccagggcgcg
gcggccgatatcattcgccgcgcgatgattcgtatgccggacgcaattcgggacctgccg
gcccggatgctgctgcaggtgcatgacgagctggtctttgaggttgaagaaggcgcggtg
cccgacctgatcgaggcggcgcgcgctgtcatgcagggtgcggccgatcccgccgtcaag
ctggatgtgccgttgatcgttgacgccggtcatggcctgaactgggccgaggcgcactaa
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