Paracoccus methylovorus: JWJ88_05920
Help
Entry
JWJ88_05920 CDS
T08684
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWJ88_05920 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_05920 (uvrB)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWJ88_05920 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JWJ88_05920 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
AAA_16
AAA_5
AAA
AAA_7
eIF3_p135
DUF4736
Motif
Other DBs
NCBI-ProteinID:
QRZ12179
UniProt:
A0ABX7JEM3
LinkDB
All DBs
Position
1:1177891..1180077
Genome browser
AA seq
728 aa
AA seq
DB search
MGHNNTNAPVARFPEVARPKLEGGRRFILHSEFQPAGDQPTAITELAKGIVEGERDQVLL
GATGTGKTFTMAKVIEATQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQP
EAYVARSDTYIEKESQINEAIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDMVVGQHYDQREFLAELVAQQYRRLDAAFQRGGFRVRGDVVEVWPAHLEDRAWRFDFFG
NELESITEFDPLTGAKSDSFKQIRIYANSHYVTPRPTLQQAIKGIRAELQVRLKQLTDEG
KLLEAQRLEQRTNFDLEMLEAAGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYRGDFRRKFTLAEHGFRLPSCMDNRPLKFEEWDSMRPQSVFVSATPAQ
WEMDQTGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEVRKVSAEGYRTLVTTLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGTFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSATSLIQTIGRAARNAEGRVIMYADRITGSMERAMAETDRRRLKQIAY
NEAHGITPQTVRKNVEDVLAGLWQGDTDQARITTKVDKPLVGANLAAHLDALRTQMRKAA
ENLEFEEAARLRDEVKRLEAVELAIADDPLARQSAIEEAAEAAVKSSGRSTAGRAGQRGG
NKRSRRHS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggccacaacaacaccaacgcccccgtcgcacgctttcccgaggtggcgcggcccaag
ctggaaggcggcaggcgtttcatcctgcattccgaattccagcccgcgggcgaccagccc
accgccatcaccgaactggccaaggggatcgtggaaggcgagcgcgatcaggtgctgctt
ggggccaccggcaccggcaagaccttcaccatggccaaggtgatcgaggcgacgcagcgc
ccggccatcatccttgcgccgaacaagacgctggccgcccagctttacggcgagttcaag
ggcttctttcccgaaaacgccgtcgaatatttcgtcagctattacgactactaccagccc
gaagcttatgttgcccgcagcgatacctatatcgaaaaggaatcgcagatcaacgaagcc
atcgaccggatgcgccactcggccacccgggccctgctggaacgcgatgacgtgatcatc
gtcgcctcggtttcctgcatctacggtatcggttcggtcgaaacctattcggccatgacc
caggacatggtggtcggccagcattatgaccagcgcgaattcctggccgaactggtggcg
cagcaataccgccggcttgacgccgcctttcagcgcggcggctttcgcgtgcgcggagat
gtggtcgaggtctggcccgcgcaccttgaagaccgggcatggcgctttgatttcttcggg
aatgagcttgaatccattaccgaattcgatccactgaccggcgccaaatccgacagtttc
aagcagatccgcatctatgcgaacagccactacgtcaccccgcgcccgactttgcagcag
gcaatcaaggggatacgcgctgaacttcaggttcggctcaagcaattgaccgacgaaggc
aagctactggaggcccaacgacttgaacaacgcacgaactttgacttggaaatgcttgaa
gctgctggggtttgcaacggtatcgagaactattcccgctatctgaccgggcgagccccg
ggcgagccacccccgacacttttcgagtttatcccggataacgccattgttttcgcggat
gaatcccacgtatcggttccgcaaatcggcggcatgtatcgcggcgactttcggcgtaag
ttcacgctggccgagcacggtttccgcctgcccagttgcatggataaccgtccgctgaag
ttcgaggaatgggacagcatgcgcccgcaatcggtctttgtcagcgccacccccgcgcaa
tgggagatggaccagaccggcggcgtcttcaccgaacaggtgatccgccccaccggcctg
ctggacccgcaggtcgagatccggccggtcgagatgcaggtggacgacctgctggacgag
gtgcgcaaggtctctgccgaagggtatcgcacgcttgtcaccaccctgaccaagcgcatg
gccgaggacctgaccgaatacctgcacgaacagggcatccgcgtgcgctacatgcacagt
gatatcgacacgattgagcgcatcgagatcctgcgcgaccttcggctgggcactttcgac
gtgttggtggggatcaaccttttgcgcgaggggcttgatattcctgaatgcgggctggtg
gcgatccttgatgccgacaaagaggggttcctgcgcagcgcgacctcactcatccagacc
attggccgtgcggcacgcaacgccgagggccgggtgatcatgtatgccgaccgcatcacc
ggcagcatggaacgcgccatggccgaaactgatcgccggcgcctgaaacagatcgcctat
aacgaggcgcatggcatcacgccgcagacggtgcgcaagaatgtcgaggacgttctggcc
gggctgtggcagggcgatacggatcaggcgcgcatcaccaccaaggtggacaaaccgctg
gtcggggccaatctggccgcgcatctggacgcgctcaggacacagatgcgcaaggccgcc
gagaatctggagttcgaagaggccgcacgcctgcgcgacgaggtcaaacggctggaggcc
gtggagctggccattgcggacgacccgcttgcccggcaatccgccatcgaagaagcggcg
gaagcggcagtcaaatcctcggggcgctcgaccgcaggacgggccgggcagcgtggcggc
aacaagcggtcacgccgccacagctag
DBGET
integrated database retrieval system
