Paracoccus methylovorus: JWJ88_05995
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Entry
JWJ88_05995 CDS
T08684
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh00300
Lysine biosynthesis
pmeh00470
D-Amino acid metabolism
pmeh01100
Metabolic pathways
pmeh01110
Biosynthesis of secondary metabolites
pmeh01120
Microbial metabolism in diverse environments
pmeh01230
Biosynthesis of amino acids
Module
pmeh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWJ88_05995
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWJ88_05995
Enzymes [BR:
pmeh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWJ88_05995
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QRZ12194
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All DBs
Position
1:1195238..1196494
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AA seq
418 aa
AA seq
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MCSPLTDVETGLDRQLANAAARFGTPAYVYATDLVEARLAHLRTHLGRWFAISFAVKSNP
NPAMLDWMRDRLDYLDISSGGEFALGRQAGWDAAKISFTGPAKRETELRAAIEGGLGELV
LESLREARLADAIAKELGCIQPVLIRIAPARVPKGFGDQMAGRPSPFGVDVEDAAEILPQ
IAALPNLRIIGLHIYSGTQCLKPEAICENWRIFMQVFSDICTTLDLSPEKLIFGAGLGIP
YHPGDNELDLSAIAAEIGPELDAFRAGPRFARSRLVLELGRYLVGPAGWFVTRVVSVKQS
RGSRIAICDGGLNDNLAASGNFGMVLRRNYVMHRIGGDENGTLPEEKQDLSGPLCTSIDK
LGGGVTLPRLEEGDLIAIHACGAYGPTASPLHFISHPMPAEVLITGGQMQDVTRIRDR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtcccttgactgacgttgagaccggccttgaccggcagttggctaatgccgcc
gcgcgtttcggcactccggcctatgtctatgccaccgatctggtcgaggcgcggctggcg
catcttcgcacgcatctagggcgctggttcgccatcagtttcgcagtcaagagcaacccc
aatccagccatgctggactggatgcgggaccggctggattacctcgacatctcatcgggc
ggagaattcgcattgggccggcaggcgggttgggatgcggcgaagatcagctttaccggc
ccggccaagcgcgaaaccgagctgcgcgccgccatcgagggcggtttgggcgagttggtg
ctggaaagcctgcgcgaggcacgactggccgatgccatcgccaaagagttgggctgcata
cagccggtgttgatccgcatcgcgccggcgcgcgtgcccaaggggttcggcgaccagatg
gcgggccggcccagcccctttggcgtcgatgtcgaggacgcggccgagatcctgccgcaa
atcgctgccctgccgaacctgcgcatcatcgggctgcatatctattcgggcacgcaatgt
ctgaagcccgaggcgatttgcgaaaactggcgcatcttcatgcaggtgttttccgatatc
tgcacgacgctggatctcagtcctgaaaaactgatcttcggtgccgggctcggcatcccc
tatcatcctggcgacaatgagttggacctgtcggcaatcgcggctgaaatcggtcccgaa
ctcgacgccttccgcgccggtccgcgctttgcccgcagccggctggtgctggaactgggc
cggtatcttgtcggaccggccggctggttcgtgacccgtgtcgtctcggtcaagcagtcg
cggggcagccgaatcgcgatttgcgacggcgggctgaacgacaaccttgccgcctcgggc
aatttcggcatggtgctgcggcgcaattacgtcatgcatcgcataggcggggacgagaac
ggcaccctgcccgaagaaaagcaggatctgtccggcccgctttgcacctcgatcgacaag
ctggggggcggcgtgactttgccgcggctggaagagggcgacctgatcgccatccacgct
tgcggcgcttacggaccgacggccagcccgctgcatttcatcagccatcccatgccggcc
gaggtgctgataaccggcggtcagatgcaggacgtgacacgtatccgggaccgctga
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