Paracoccus methylovorus: JWJ88_07020
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Entry
JWJ88_07020 CDS
T08684
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh00521
Streptomycin biosynthesis
pmeh00523
Polyketide sugar unit biosynthesis
pmeh00541
Biosynthesis of various nucleotide sugars
pmeh01100
Metabolic pathways
pmeh01110
Biosynthesis of secondary metabolites
pmeh01250
Biosynthesis of nucleotide sugars
Module
pmeh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWJ88_07020 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWJ88_07020 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWJ88_07020 (rfbC)
Enzymes [BR:
pmeh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JWJ88_07020 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QRZ12373
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Position
1:complement(1399361..1399942)
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AA seq
193 aa
AA seq
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MQIEPTFLGGVLVLVPRRFGDVRGFFCESWSGRTLLDAGLDLPEFVQDNHSLSAAAGTLR
GLHFQAPPHAQGKLVRCGRGRLFDVAVDIRKGSPSYGQWTGVELSFENGRQLWIPPGFLH
GFVTREPDTEILYKCTDYYAPDCDGAVAWDSIGIDWGVAGQPILSAKDAQAPSWNEFDSP
FTYEGPFGYEAGL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaaccgacatttcttggtggtgtattggtgcttgttccccgtcggtttggg
gatgtgcggggttttttttgcgagagctggagcggccggacgcttctggatgctgggctc
gatcttccggaattcgttcaggataaccattcgttatcggcggcggcggggactttgcgg
ggcttgcatttccaggcgccgccccatgcccagggcaagctggtgcgctgcgggcggggg
cggcttttcgacgtggcggtcgatatccgcaaaggcagccccagctatggccaatggacc
ggggtcgagctttcctttgagaacggccgccagctttggatcccgcccggctttctgcat
ggcttcgtcacgcgagagccggatacggaaattctttacaaatgcacggattattacgcg
cccgattgcgatggggcggtggcctgggacagtatcggcatcgactggggcgtcgccggc
cagccgatcctgtcggccaaggacgcgcaggccccgtcatggaacgagttcgacagccct
ttcacctatgaggggccctttggttacgaggcgggattatga
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