Paracoccus methylovorus: JWJ88_10830
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Entry
JWJ88_10830 CDS
T08684
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWJ88_10830 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeh03021
]
JWJ88_10830 (rho)
03019 Messenger RNA biogenesis [BR:
pmeh03019
]
JWJ88_10830 (rho)
Transcription machinery [BR:
pmeh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
JWJ88_10830 (rho)
Messenger RNA biogenesis [BR:
pmeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JWJ88_10830 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
NACHT
AAA_22
ATPase_2
OB_RNB
AAA
AAA_25
Fungal_virus_P2_C
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
QRZ13056
UniProt:
A0ABX7JGQ8
LinkDB
All DBs
Position
1:complement(2146768..2148039)
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AA seq
423 aa
AA seq
DB search
MTEERLNLSDLKAKSPADLLSMAEEWEIENASTMRKGEMMFSILKEHAEEGFEIGGDGVL
EVVQDGFGFLRSPEANYLPGPDDIYVSPDMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VEKINFENPEKARHKVAFDNLTPLYPNERLKMEVEDPTIKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIANSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDAKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKTNGEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacgccttaacctgtccgatctcaaggccaagagcccggccgacttgctt
tccatggccgaggaatgggagatcgagaacgcttcgaccatgcgcaagggcgagatgatg
ttctcgatcctgaaagagcatgccgaggaggggttcgaaatcggcggcgacggcgtgctg
gaggtggttcaggacggctttggctttctgcgctcgcccgaggcgaactatctgccgggt
ccggacgatatttacgtcagccccgacatgatccgccagcacagcttgcgcacgggcgat
acggtcgagggtgtgatccgtgcccccggcgagaatgaacgctatttcgccctgaccaag
gtcgaaaagatcaatttcgaaaatccggaaaaagcccggcacaaggtcgcgttcgacaac
ctgacgccgctttacccgaacgagcgcctgaaaatggaggttgaggatccaaccatcaag
gatcgctcggcccggatcatcgacctggtggctccgatcggcaagggtcagcgttcgctg
atcgtggcgccgccgcgtactggtaagacggtgctgctgcaaaacatcgccaattcgatc
gagaaaaatcacccggaatgctatctgatcgttctgctgatcgacgaacgcccggaagag
gtgaccgatatgcaacgttcggtgaagggagaggtgatctcctcgaccttcgacgagccg
gccagccgccacgtggcggtgtcggaaatggtgatcgagaaagccaagcgtctggtcgaa
cacaaacgagatgttgtgattcttctggattcgatcacaagacttggtagggccttcaac
accgtggtgcccagctcgggcaaggtcctgacgggtggtgttgatgcgaatgccctgcag
cggcccaagcggttctttggcgcggcaaggaatatcgaagagggcggttcgctgaccatc
atcgctacggcgttgatcgatacgggttcgcgtatggacgaagtgatctttgaagagttc
aaaggcaccggcaacagcgaaatcgtgctggatcgcaaggtcgcggacaaacgtgtgttc
ccagccatggatatcctgaagtccggcacgcgtaaggaggagctgctggtcgatgctaaa
gatctgcaaaagacctatttgttgcggcgcattctgaacccgatgggcacgacggatgcg
atcgagttcctgatttcgaagttgaagcaaaccaaaaccaacggcgaattcttcgattcg
atgaacgcctga
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