KEGG   Paracoccus methylovorus: JWJ88_11090
Entry
JWJ88_11090       CDS       T08684                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pmeh  Paracoccus methylovorus
Pathway
pmeh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmeh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JWJ88_11090 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmeh02044]
    JWJ88_11090 (tssM)
Secretion system [BR:pmeh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JWJ88_11090 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_28 AAA_22 AAA_30 AAA_16 AAA_24 AAA_11
Other DBs
NCBI-ProteinID: QRZ14432
LinkDB
Position
p1:complement(32126..35656)
AA seq 1176 aa
MRMIKTIFRFFLSRGFWTFVGLALLAAAIWFYGPLISVGEAAPLESPEVRAICLGAILVL
WLLILLLGQMRAARRNRMFVTELAAPQPAPETPDAAAEIGSKFHEILATLGHSRLGKRRF
LREMPWYVIIGPPGTGKTTALRQSGLNFPIALNDDLKGVGGTRNCDWFFTETAVLVDTAG
RYTDQSSEPERDAAEWAGFLDLLKKHRGRRALNGVIVTLSLDELLGPEDALRRHAREIRK
RLTEIAERLEMQLPVYLMLTKADRLPGFEAFFGALTSRERAQVWGAALPVDALPEPEAIT
RELRSLAAVLEGRLEGRLAEDADLPQRAAIFRFPAEFERLEPPLRLLIDTAFGESRYEQA
PWLRGFYLTSATQEGSPLDRMLSGMAAGFGLAPAPMQHRAMGERRSFFLHDLLARVIFGE
AGLALFDPRAEERRTWLWRGSAAVAALLVLLAGLGFLFNTMRQSGAVADQQRLLADLSGR
LANAASRQAPTEPLDMPVALDAMTEIEAAQTPLPGGALALIGPSAAAEIEGAARLAQERG
LRNLLEPRMVAFLEATMWRQIRDPDFLLGALKAYQMLTGLGPYDRAWLAEWWQEVLPRFA
AETPFPTEAARVWQLAALERLGHDETRITADPQLVEAALQAICTVPLSVRTYRALMSEPE
IAALPDWVPAEHAGPLAGQVLTRLSGQTLRQGIPGAFTWQGFHATVLPLLPGMAEAALND
RKVFAGGCAESADASAGSLQADMMKLYQDDFITAWEGFLRDVRLAPIPDLATATANLKDL
ASPDSTLKRLLNAVVAETDLTRAPEQGDSPEVNPGVLKKVAGKLGLGAAAKIGTKVAAVA
RRPGEAEPPAPGAEIARHFAPLKAIVAEVDGKPPLLLDAETALGALSKELLTVQASPDPQ
AALLSRGGLPQLTGDLRNVAATLPDPVNAWLGAIAGDTISVTREAILAQLNARWRADVLP
FCRTATGGRYPFVADSAIDVTVSDFQQLFGPGGRFDTFTNETLAPYVDTSARPWRWRADL
GLDARTLTPFEQARSIRDALFPGGAGPVMAFTLEPKDLTPNAARVTLNVDGQNLVYFNAA
ARPIPMTWPGKDGTNLISLSFMPVDGSGEAISTETGAWAWLRMIRKAGLSRSAQPEVFGL
RLAIGPYAASFELRAASVENPFDLSMFGAFRCPEAF
NT seq 3531 nt   +upstreamnt  +downstreamnt
atgcgtatgatcaagaccatattccggtttttcctgtcgcgcgggttctggacgttcgtc
gggctggcgctgctggcggcggcgatctggttctatggtccgctgatctcggtcggcgag
gcggcaccgctggaaagccccgaggtccgcgcgatctgtctgggcgccattctggtcctg
tggctgctgatcctgctgctggggcagatgcgcgccgcgcggcgcaaccgcatgttcgtc
accgaacttgccgcgccgcagcccgcgcccgaaacccccgatgccgccgccgagatcggc
agcaagtttcacgaaatcctcgccacgctggggcattcgcggcttggcaagcggcgcttc
ctgcgcgagatgccctggtatgtcatcatcggcccgcccggcaccggcaaaaccacggcg
ctgcgccaatcggggctgaactttcccatcgcgctcaacgacgacctcaagggcgtcggc
ggcacccggaattgcgactggttctttaccgaaaccgcggtgctggttgataccgccggc
cgctataccgaccaatccagcgagccggagcgcgacgcggcggaatgggccgggttcctt
gacctgctcaagaagcatcgtggacggcgggcgctgaacggggtgatcgtcacgctgtcg
ctggacgagcttttgggccccgaggacgccctgcgtcgccatgcccgcgaaatccgcaag
cgcctgaccgagatcgccgagcggctggaaatgcagttgcccgtctatcttatgctgacc
aaggccgaccggctgccgggctttgaggcattctttggcgcgctgacctcgcgcgagcgg
gcgcaggtctggggggccgccctgccggtggacgccctgcccgagcccgaggcgatcacc
cgcgaactccgcagcctcgccgcggtgctggaggggcggctggaggggcggctggccgag
gatgccgacctgccgcaacgcgccgccatctttcgttttccagccgagttcgagcggctg
gagccacccctgcggctgctgatcgacacggccttcggcgaaagccgctatgaacaggcg
ccatggctacgcgggttttacctgacctcggccacgcaagaaggctcgcccctcgaccgg
atgctaagcggaatggcggcggggtttggccttgcgccagcgccgatgcagcatcgcgcc
atgggcgagcggcggtcgtttttcctgcacgacctgctggcccgagtgatctttggcgag
gcgggactggcgcttttcgatccgcgcgccgaggaacgccggacatggctgtggcgtggt
tcggccgcagtggcggcactgctggtgctgttggctggtctgggctttctgttcaacacc
atgcgccagtccggtgcggtcgcggatcagcagaggctgctggccgatctgtcggggcga
ttggccaatgccgcctcgcgtcaggccccgaccgaacccttggacatgcccgttgccctt
gacgcaatgaccgagatcgaggcggcgcagacaccgctgccgggcggcgcgctggcactg
atcggcccctcggccgcggccgagatcgagggcgcggcccggcttgcgcaggaacgcggg
ctgcgcaaccttttggaaccgcgcatggtcgcctttcttgaggcgacgatgtggcggcag
atccgcgacccggattttctgctgggcgcgctgaaagcctatcagatgctgaccgggctt
ggtccctatgaccgggcgtggctggcggaatggtggcaagaggtgctgccccggtttgcc
gccgaaaccccctttccgaccgaggccgcccgcgtctggcaactggccgcgctggaacgg
ctgggccatgacgaaacccgcatcaccgccgacccgcaactggtcgaggccgccttgcag
gcgatctgcaccgtgccattgtccgtgcgcacctatcgcgcgctgatgtccgaacccgaa
atcgccgccctgcccgactgggtcccggcggaacatgccgggcccttggccgggcaggtg
ctgacccgcctgtcgggtcagacgttgcggcagggcattccgggtgcgttcacatggcaa
ggctttcacgccacggtcctgccgctgctgcccggcatggccgaggcggcgttgaacgac
cgcaaggtctttgccgggggttgcgcggaaagcgccgatgcctcggccggttcgctgcaa
gccgacatgatgaagctttaccaggacgatttcatcaccgcgtgggaagggtttctgcgc
gatgtgcggctggccccgatccccgaccttgccacagccacggcgaacctcaaggacctt
gccagccccgacagcacgctcaagcggctgctgaacgccgtggttgccgaaaccgacctg
acccgcgcacccgaacagggcgacagccccgaggtcaatccgggcgtgctgaagaaggtg
gccggcaagctgggccttggcgccgccgccaagatcggcaccaaggtcgccgccgtcgcg
cgcaggccgggcgaggccgagccgcctgcccccggggccgaaatcgcccggcatttcgcg
ccgctcaaggccatcgtggccgaggttgacggcaagccaccgttgctactggacgccgag
accgcgcttggcgccctgtcgaaagagcttttgaccgtgcaggccagccccgatccgcaa
gcggcgctgctgtctcggggcgggctgccgcagttgaccggcgacctgcgcaatgtcgcc
gcgaccctgcccgatccggtgaacgcatggctgggcgccatcgccggcgacacgatcagc
gtcacgcgcgaggcgattctggcgcaattgaacgcgcgctggcgggcggatgtgctgccc
ttctgccgcacggcgacgggcgggcgctatccctttgtcgcggattcggccatcgacgtg
acggtcagcgatttccagcagcttttcggaccgggcgggcgtttcgacacctttaccaac
gaaacgctggcaccctatgtggacaccagcgcgcgaccttggcgctggcgggcggatctg
ggtctggacgcccgcacgctgaccccgttcgagcaggcccggtcgatccgcgacgcgctg
tttccgggcggcgccggtccggtgatggccttcacgctggagcccaaggacctgaccccc
aacgccgcgcgggtaacgctgaacgtggacgggcaaaacctggtctatttcaacgccgcc
gcccggccgataccgatgacatggcccggcaaggatggcaccaacctgatctcgctcagc
ttcatgccagtcgatggctcgggcgaggcgatcagcaccgaaaccggcgcatgggcatgg
ctgcggatgatccgcaaggctggcctgtcccgctcggcccagcccgaggtgttcggcctg
cgactggccatcggcccctatgccgccagtttcgagctgcgcgcggcctcggtcgaaaat
cccttcgatctcagcatgttcggcgcgttccgatgcccggaggccttttga

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