Paracoccus methylovorus: JWJ88_11475
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Entry
JWJ88_11475 CDS
T08684
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03030
DNA replication
pmeh03430
Mismatch repair
pmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWJ88_11475
03430 Mismatch repair
JWJ88_11475
03440 Homologous recombination
JWJ88_11475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeh03032
]
JWJ88_11475
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_11475
Enzymes [BR:
pmeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWJ88_11475
DNA replication proteins [BR:
pmeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWJ88_11475
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWJ88_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QRZ14504
LinkDB
All DBs
Position
p1:121956..124094
Genome browser
AA seq
712 aa
AA seq
DB search
MKFSLHRLMLVAVPGLALAMWVLGGAVLFYATLPPGQRDGLFSALLPAVQGSGAILFGWW
LAGSALAGWLAVRLYAQHVQTPARLADAARLLADNAAAPRLQPTAPGALGELAGAINRLA
DQRQTLQGDMARLVAEAQQKVAQERDQLGALMAELRQSVIVCNLDGRILLYNDHTRSLFQ
RVLGGQQMAGGAELIGLGRSIHGVIDRALIEHARETVDRHIARGEAAVSAQFVTTTPSGS
LLHVVLAPVRPQAGEALAISGYVLLLGDITQDYAGQSRRDRRLTELTEASRASLANMQAA
LDMLDYPDLEPAERDGFHAIVRDEVAAMGQRLQTLTEDASQEILTRWPLQEMLGDDLLAA
AAQHVLAQTGRVAKVVSADEGLWLRVDSFSLIQALGALAGQLAGPRGMPALTLRLAPAAT
PGWAHLDLVWPLDAAVPAAGAMGNGDHDVTARDIAERHGGELWLEQDRPAGLSFFRFLLP
TALSGPEAEALEARPEFYDFDLFAASDSSRSLDDQPLERLTYTVFDTETTGLNPAQGDEI
IQIGALRIVNGKILRGERFDQLVDPGREIPEESIPYHGILPEMVQGQPRIAQVLPAFHAY
ASDTVLVGHNVAFDMRFLQLKEAATGVRFDQPVLDTLLLASIAQPHEPSQSLEAIAARLG
VEITLRHNAASDALVTAEVFMRLLPLLQARGIVTLGQARAEAQNSYYARLRY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcagcctgcaccgccttatgcttgtcgccgtgccggggttggcgctggcgatg
tgggtgcttgggggggcggtgctgttttacgcgacgctgccgccaggacagcgcgacggg
ctgttttcggcgcttctccccgcagttcagggcagcggtgcgatcctgttcggctggtgg
ctggccggctcggcgctggcgggctggcttgcggtccggctttatgcccagcacgtccag
accccggcgcggctggccgatgcggcgcggctgctggccgacaatgccgccgccccccgg
ttgcagccgactgcgcccggcgcccttggcgaactggccggggcgatcaaccgactggcc
gaccagcgccagaccttgcagggcgatatggcccggctggtggccgaggcgcagcaaaag
gtcgcgcaggaacgcgaccagcttggcgcgctgatggccgaactgcgccagagcgtcatc
gtgtgcaatctcgacggccggatcctgctttacaacgaccatacccgcagcctgtttcag
cgcgtcctgggcggacagcagatggcaggcggggccgagctgatcgggctgggccgctcg
atccacggcgtcatcgaccgtgctctgatcgaacatgcgcgcgagaccgtggaccgccat
atcgcgcgtggcgaggcggcggtgtcggcgcaattcgtcaccaccacgccctccggcagc
ctgctgcatgttgtgctggccccggtgcgcccgcaggccggcgaggccctcgcgatcagt
ggctatgtgctgctgcttggcgatattacccaggattatgccggccagtcccgccgcgac
cgccgcctgaccgaactgaccgaggccagccgcgcctcgctggccaatatgcaggcggcg
ctggacatgctggactatcccgatctggaaccggccgagcgcgacggctttcacgccatc
gtccgcgacgaggtggcggccatgggccagcggctgcagaccttgaccgaggatgcctcg
caagagatcctgacccgctggccgttgcaagagatgctgggtgacgaccttctggcggca
gcggcacagcatgtgctggcccagaccgggcgggtcgccaaggtcgtgtccgccgatgaa
gggctgtggctgcgggtggacagtttttcgctgattcaggcgcttggcgcactggccgga
cagttggccgggccgcgcggtatgccggcgctgaccctgcgccttgcgcctgccgctacg
ccgggctgggcgcatcttgatctggtctggccgcttgatgccgccgtgcccgctgccggc
gccatgggcaatggcgatcacgatgtcaccgcccgcgacatcgccgaacgccacggcggc
gaattgtggctggaacaggatcgcccggccggactgtcctttttccgctttctgttgccg
accgccttgtcgggccccgaggccgaggcgctggaggcgcgccccgagttctatgatttc
gacctgttcgcggccagtgattccagccgctctctggacgaccagccattggagcgactg
acctataccgtcttcgacaccgaaacgacggggctgaacccggcacagggcgacgagatc
atccagatcggcgcgttgcggatcgtgaacggcaagatcctgcgcggcgagcgtttcgac
cagcttgttgatcccggccgtgagatccccgaggaatccatcccctatcacggcattctg
cctgaaatggtgcagggccagccccgtatcgcccaggtgttgccggcatttcacgcctat
gcctcggacacggttctggttggccataacgtcgcctttgacatgcgcttcctgcagttg
aaagaggcggcgaccggggtgcgctttgaccagccggtgctggacacgctgcttttggcc
agcatcgcgcagccgcacgagccctcgcagtcgcttgaggccattgccgcgcggctgggg
gtcgaaatcacccttcgccacaatgccgccagcgacgctctggtcacggccgaggtgttc
atgcggcttttgccgctgttgcaggcgcgcggcatcgtcacgctggggcaggcacgggcc
gaggcccagaactcttattacgcgcggctgcgctattga
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