KEGG   Paracoccus methylovorus: JWJ88_11945
Entry
JWJ88_11945       CDS       T08684                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pmeh  Paracoccus methylovorus
Pathway
pmeh00010  Glycolysis / Gluconeogenesis
pmeh00020  Citrate cycle (TCA cycle)
pmeh00260  Glycine, serine and threonine metabolism
pmeh00280  Valine, leucine and isoleucine degradation
pmeh00310  Lysine degradation
pmeh00380  Tryptophan metabolism
pmeh00620  Pyruvate metabolism
pmeh00630  Glyoxylate and dicarboxylate metabolism
pmeh00640  Propanoate metabolism
pmeh00670  One carbon pool by folate
pmeh00785  Lipoic acid metabolism
pmeh01100  Metabolic pathways
pmeh01110  Biosynthesis of secondary metabolites
pmeh01120  Microbial metabolism in diverse environments
pmeh01200  Carbon metabolism
pmeh01210  2-Oxocarboxylic acid metabolism
pmeh01240  Biosynthesis of cofactors
Module
pmeh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pmeh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pmeh_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pmeh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pmeh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pmeh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JWJ88_11945 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JWJ88_11945 (lpdA)
   00620 Pyruvate metabolism
    JWJ88_11945 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JWJ88_11945 (lpdA)
   00640 Propanoate metabolism
    JWJ88_11945 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JWJ88_11945 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JWJ88_11945 (lpdA)
   00310 Lysine degradation
    JWJ88_11945 (lpdA)
   00380 Tryptophan metabolism
    JWJ88_11945 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JWJ88_11945 (lpdA)
   00670 One carbon pool by folate
    JWJ88_11945 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmeh04147]
    JWJ88_11945 (lpdA)
Enzymes [BR:pmeh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JWJ88_11945 (lpdA)
Exosome [BR:pmeh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JWJ88_11945 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox NAD_binding_8 Pyr_redox_3 DAO GIDA FAD_binding_2 HI0933_like UDPG_MGDP_dh_N FAD_oxidored FAD_binding_3 AlaDh_PNT_C 3HCDH_N
Other DBs
NCBI-ProteinID: QRZ14594
LinkDB
Position
p1:complement(214578..215966)
AA seq 462 aa
MREIQCRLLIVGAGPGGYVCAIRAGQLGVDTVIVDAQPPGGTCLNVGCIPSKALIHAADE
FHQLTQLSSKPSMGIAAADPQLDLAATVEWKDGIVERLTGGVATLLRKAKVRLVTGQATV
RDGKTVLVDTPEGPVQIRAEVLVLATGSEPIELRSLPFGGKVISSTDALALTEVPGRLAV
VGGGYIGLELGIAYAKLGAEVTVVEAAPRILPQYDAELTRPVAQRLTGLGVRVLTGARAG
GLSDSGALRVAGVDGAEDIQADKVLVTVGRRPRATGAGVESLRLDMAGPFIRIDERCRTS
MTGVFAIGDVTGEPMLAHRAMAQGEMVAEIVAGKRLVWDKRAIPAVCFTDPEIVSVGLSP
DEAATQGLKVITGLFPFAANGRAMTAADEAGFVRVTAREDTHEVLGIQAVGADVAEMAGG
FALALEMGARLEDITGTIHAHPTRGEALHEACLRALGHALHI
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgcgcgagatccaatgcagactgctgatcgtcggcgccggtccgggcggctatgtctgc
gcaatccgtgccgggcaactgggggtggacacggtgatcgtggatgcccagcctccgggc
ggaacatgcctgaacgtgggctgcatcccctcgaaggcactgatccatgccgccgatgaa
tttcatcaacttacacagctttcctcgaaaccttcgatgggcattgccgcggcagatccc
caactggatctggcggcgacggtggaatggaaagacggcatcgtcgagcggctgaccggc
ggcgtggcgacgcttttgcgcaaggccaaggtgcggctggtcactggccaggccacggtc
cgcgacggcaagaccgtgctggtggatacgcccgaaggcccggtgcagatccgcgccgag
gttctggttctggccaccgggtccgagcccatcgaactgcggtcgctgccctttggcggc
aaggtgatttcttcgaccgatgcgctggccctgaccgaagtgcctggacgtctggccgtg
gtcggcggcggctatatcgggctggaactggggatcgcctatgccaagctgggcgccgag
gtgacggtggtcgaggccgccccgcgcatcctgccgcaatatgacgccgaactgacccgg
cccgtggcgcagcgcctgacagggctgggcgtccgggtgctgaccggcgcgcgcgccggc
gggctgtcggacagcggggcgctgcgcgtcgccggtgtcgacggggccgaggatattcag
gccgacaaggtccttgtcaccgtcggccgccgcccacgcgcaaccggcgcgggggtagag
agcctgcggctggacatggccggtccctttatccgcatagatgaacggtgccgcacctcg
atgaccggggtttttgccatcggggatgtgacgggcgagcctatgctggcgcaccgcgcc
atggcccaaggcgagatggtggccgagatcgtcgccggcaagcggctggtctgggacaag
cgcgcgattcccgcggtctgttttaccgaccccgagatcgtcagcgtcggcctgtccccg
gacgaggccgcgacacagggcctgaaggtcatcaccgggctgttcccctttgccgcgaat
ggccgggcgatgacggcggcagacgaggcgggctttgtccgcgtcaccgcgcgcgaggac
acgcacgaggtgcttggcattcaggccgtcggcgcggatgtcgcggaaatggccggcggc
tttgcgctggcgctggagatgggcgcgcggctcgaggacatcaccggcaccatccacgcc
caccccacccggggcgaggcactgcacgaagcctgcctgcgcgcccttggccacgcgctg
catatctag

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