Paracoccus methylovorus: JWJ88_13565
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Entry
JWJ88_13565 CDS
T08684
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWJ88_13565 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_13565 (mutM)
Enzymes [BR:
pmeh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JWJ88_13565 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JWJ88_13565 (mutM)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JWJ88_13565 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QRZ15378
LinkDB
All DBs
Position
2:complement(86705..87550)
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AA seq
281 aa
AA seq
DB search
MPELPEVETVRRGLQPHLEGRVITRAEARRPDLRWPLPPDLVQVLTGARVVALRRRSKYI
LADLEDRGSLLLHLGMSGRMLIEGESQGEFHREPAILPRHDHVVFWTDQGTRITFNDARR
FGMVDLVAPGATHPLLAHLGPEPLSDAFTPEVLSRAFAGRRMPVKAALLDQRIVAGLGNI
YVSEALHRAGIDPRRLAGQIAPDEIAALVGHVRDVLEEAIAAGGSSLRDHRQATGELGYF
QHSFRVYGREDAACPTPGCAGRVQRIVQSGRSSYFCPLCQK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactgccagaggtcgaaaccgtccgacgcggccttcagccgcatcttgaaggg
cgggtcatcacccgcgccgaggcccgccgcccagacctgcgctggcccttaccgcccgat
ctggtgcaggtgctgaccggcgcgcgggtggtggcgctgcgccgtcgctccaaatacatc
ctcgccgacctggaagatcggggcagcctgcttttgcatctgggcatgtcgggtcggatg
ctgatcgagggggaatcgcagggggagtttcatcgcgagccggccatcctgccgcgccac
gaccatgtggtattctggaccgatcaggggacacgcatcaccttcaacgacgcgcggcga
ttcggcatggtcgatctggtggctccgggtgcgacgcatccactgctggcgcatctggga
cccgaacccttatccgacgccttcacgccagaggtgctgtcgcgcgcattcgccgggcgg
cgcatgccggtcaaggcggcgctgctggaccagcggatcgttgcggggctgggcaatatc
tatgtctcggaggcactacaccgcgccggaatcgacccgcggcggctggccgggcagatc
gcgcccgatgagatcgcggcactggtcggccatgtccgcgatgtgttggaagaggccatc
gcggccggcgggtcgtccctgcgcgatcatcggcaggcgaccggcgagcttgggtatttc
cagcactcctttcgcgtctatggccgagaggatgccgcctgccctacgccgggctgtgcc
ggaagggtccagcgcatcgtgcaatccggccggtcgagctatttctgtccgctttgccag
aagtga
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