Paracoccus methylovorus: JWJ88_14230
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Entry
JWJ88_14230 CDS
T08684
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03420
Nucleotide excision repair
pmeh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JWJ88_14230
03430 Mismatch repair
JWJ88_14230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_14230
Enzymes [BR:
pmeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWJ88_14230
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWJ88_14230
MMR (mismatch excision repair)
Other MMR factors
JWJ88_14230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF7742
AAA_11
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
QRZ15502
LinkDB
All DBs
Position
2:219822..222215
Genome browser
AA seq
797 aa
AA seq
DB search
MSNFDDSDAFEAAAAPPVPLSQRAMGARPTPYLDGLNPAQRDAVEALDGPVLLLAGAGTG
KTRALTTRIAHLLNLGRARPGQILAVTFTNKAAREMKNRIGRLLGEMVEGMPWLGTFHSI
SVKILRRHAELIGDSELHLKPSFTILDTDDQIRLLKQLIQAENIDEKRWPARQLAHLIDS
WKNRCLSPAKLPKGEERAFDGLGGRLYAAYQRRLLELNAVDFGDLLMHCVNLFQAHPDVL
RTWQDRFRYILVDEYQDTNVAQYMWLRLLAQAHRNICCVGDDDQSIYGWRGAEVGNILRF
ETDFPGAQVIRLEQNYRSTPHILAAASGLIAANKGRLGKTLWTEAEDGEKVRLIGHWDSE
AEARWIGEEIEAFHGGHRHSIGQRSLNDIAILVRASHQMRAFEDRFMTIGLAYRVIGGPR
FYERQEIRDAMAYFRLAISPTDDLAFERIVNVPKRGLGDKAVQKIQLEARQRGLSLLEGA
ASAIATGVIGGKGAGALRQFTESMGRWHADALDSRVNHVELAERILDESGYTAMWQNDKS
PDAPGRLDNLKELIKALEEFENLQGFLEHVALVMDNDKGEQSEEVSIMTLHAAKGLEYPL
VFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRGEELVTISFAGNRRMYGQWQSS
LPSRFIDELPEDHVEVLTPPGLYGGGYGAAAQSFGQSGMHERAVQADVYNSPGWKRMQQR
SAERAQPVHRTPIVIDAEPAMRFAVGDRVFHQKFGNGTIMGIAEDTLTVEFVTGFKTIKA
GYVQPASQGGTLDDVPF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatttcgacgactcggatgccttcgaggccgcagccgcaccgcccgtcccgctt
tcgcagcgtgccatgggtgcgcggcccacgccgtatctggacggtctgaacccggcgcag
cgtgatgcggtcgaggcgctggacgggcccgtcttgctgctggccggcgccggtaccggc
aagacccgcgcgctgactacgcgcattgcacatctgctgaacctcgggcgggcgcggccg
gggcagattctggccgtgacctttaccaacaaggccgcgcgcgagatgaagaaccgcatc
ggccgcctgttgggcgagatggtcgagggcatgccgtggctgggcacgttccactcgatc
agcgtcaagatcttgcgccggcacgccgaactgatcggcgacagcgagttgcatctgaag
cccagctttaccattctggataccgacgaccagatccggttgctcaagcagttgattcag
gccgagaatatcgacgagaagcgctggcccgcaaggcagcttgcgcatctgatcgacagt
tggaagaaccgctgcctgtctccggccaagctgcccaagggcgaggagcgcgccttcgac
ggcctcggtggccggctatacgccgcctatcagcgccggctgcttgaactgaacgcggta
gatttcggcgacctgctgatgcattgcgtcaacctgtttcaggcccacccggacgtgctg
cggacctggcaggaccgttttcgctatattctcgtggacgagtatcaggacacgaacgtc
gcgcaatacatgtggctgcggctcttggcgcaggcgcatcgcaacatctgctgcgtgggc
gacgacgaccagtcgatctatggctggcgcggtgccgaggtcggcaacatcctgcgcttc
gagaccgattttcccggcgcgcaggtcatccggctggagcagaactatcgttcgaccccg
catatccttgccgctgcatcggggctgatcgcggccaacaaggggcggctgggcaagacg
ttgtggaccgaggcggaagacggcgaaaaggtccgcctgatcggccactgggacagcgag
gccgaggcgcgctggatcggcgaagagatcgaggccttccatggcggccatcgccacagt
atcgggcagcgcagcctgaacgacattgccattctcgtgcgcgcctcccaccagatgcgg
gcgttcgaggaccggttcatgaccatcggtctggcctatcgggtgatcggtggcccgcgc
ttttacgagcgccaagagatccgcgacgccatggcctatttccggctggcgatatcgccc
accgacgacctggcgttcgagcgcatcgtgaacgtccccaagcggggcttgggcgataag
gcggtgcagaagatccagcttgaggcgcgccagcgcggcctgtcgctgctggagggcgcg
gcctcggccatcgccacgggggtgattggcggcaagggcgcgggggcgctgcgccaattc
accgaatcgatggggcgctggcatgccgatgcgctggacagtcgcgtcaaccatgtcgaa
ctggccgaacggatcttggacgaatccggctataccgccatgtggcagaacgacaagtca
cccgatgcgccgggtcggctagacaacctgaaagagttgataaaggcgctggaagagttt
gaaaaccttcagggtttccttgagcacgtcgcgctggtcatggacaatgacaagggtgag
cagtccgaagaggtcagcatcatgacccttcatgccgccaagggcctggaataccctctc
gtcttcctgccggggtgggaggacgggctgttccccagccagcgcagcatggatgaaagt
ggtctgaaagggctggaggaagagcgccgccttgcctatgtcggcatcacccggggcgag
gaactggtgacgatcagctttgccggcaaccgccgcatgtatggccaatggcaatccagc
ctgccctcgcgctttatcgacgaactgcccgaagatcatgtcgaggtgctgacgcccccc
ggcctttatggcggcggctatggtgcggccgcgcaatccttcgggcaatccggcatgcat
gaacgggcggtgcaggcggatgtctataactctccgggctggaagcggatgcagcaacgc
agtgccgagcgcgcacagcccgtgcatcgcacaccgattgtcatcgatgccgaaccggcg
atgcggttcgccgtcggtgatcgtgtatttcatcagaaatttggcaacggcacgatcatg
ggcattgccgaggatacgctgacagtcgagttcgtgaccggtttcaagaccatcaaggcg
ggctatgtgcagcccgcctcgcaaggcggcacgctggacgacgtgccgttctag
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integrated database retrieval system
