Paracoccus methylovorus: JWJ88_18325
Help
Entry
JWJ88_18325 CDS
T08684
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh03030
DNA replication
pmeh03430
Mismatch repair
pmeh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWJ88_18325 (dnaE)
03430 Mismatch repair
JWJ88_18325 (dnaE)
03440 Homologous recombination
JWJ88_18325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmeh03032
]
JWJ88_18325 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmeh03400
]
JWJ88_18325 (dnaE)
Enzymes [BR:
pmeh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWJ88_18325 (dnaE)
DNA replication proteins [BR:
pmeh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWJ88_18325 (dnaE)
DNA repair and recombination proteins [BR:
pmeh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWJ88_18325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
QRZ14906
LinkDB
All DBs
Position
2:complement(1029820..1033290)
Genome browser
AA seq
1156 aa
AA seq
DB search
MLEKSPRFIHLRTHSEHSLLEGAVPVKKLADLAAQNGMPAVALTDSNALFAALEFSVKAQ
DTGVQPIVGCQVTLQADATGPVVLLAQNEAGWLNLMELSTCLYLRDDHALPHVTPEELEA
HAEGLICLTGGAGGPIGQLVLQGRTTEARDLTQRLAAAFPTRLYVELQRHHDAEGQPVPD
EAGSEGGMIDIAYALELPLVATNDVYFPKPDLYDAHDALICISERAYVDQTAPRRRLTPQ
HYFKSAAEMATLFADLPEAVENTVEIARRCAFAVSKRKPILPRFADDEIEELRRQAWDGL
RTRLAVIPHSTTVEAYEERLRFELGIIEQMGFPGYFLIVADFIKWAKEHGIPVGPGRGSG
AGSLVAYALTITDLDPMRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIQYVQEKYGRD
KVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPVEGVKPVSVIKALTDEPRLRE
AAKEEVVGRLLDYAAKIEGLLRNASTHAAGVVIGDRPLDRLVPLYRDPASDMPATQYNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINAGGRPLHVTADGKQLYEPASGAENQINAIPL
DDKASYELFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRPLESIHPSIDDILAETQGIIVYQEQVMQIAQVMGGYSLGGADLLRRAMGKKIAE
EMAKERPKFVEGCKAQGIDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAVYKREADRMGIETVPPCVNRSDASFSVRDGKVLYALGALK
GVGIEAMKLIVQARGERPFVDMHDFARRVDMRRVGKRPLEMLARAGAFDMLDSNRARVLK
ALDGLVAWSAAVQEAAASSQTSLFGGGEDLPPPRPVAAPVWMPTEKLAEEHAAVGFYLSG
HPLDDYQPALRRKGVQTLAEVTLAAQEGALVAQLAGTVSQRQEKKSARGTRFAFVGLSDP
TGLYEVTVFSDTLDAHRQHLEPGENVVLQVQVEPSGDQVKLLARSVMPLDQAVADAGANR
LAVEIAGLDAVPAIAEALARIQSEFNAPARARGPIALRLKDGADLVDIEITEDAPLTTPA
RQALRVIPGVLEVLEE
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaaatccccccgattcattcatctgcgcacacattctgaacattcgttgctg
gaaggcgcggtgcccgtcaagaaacttgctgatcttgcggcacaaaacggcatgcctgcc
gtggcgctgacagacagcaacgcgctgttcgcagcgttggagttctcggtcaaggcgcag
gacacaggcgttcagccgattgtcggctgccaggtgacgttgcaggccgacgcgacgggt
cccgtggtgctgctggcccagaacgaggctggctggctgaacctgatggagctttcgacc
tgtctttatcttcgcgacgatcatgccttgccgcatgtgacgcccgaggagttggaggcc
catgccgaagggttgatctgcctgaccggcggcgctggcggcccgatcggccaattggtg
ctgcaaggtcgaaccaccgaggcgcgcgatctgacgcaaagattggcggcggcttttccg
acccggctttacgtcgaactacagcgccatcacgacgccgagggtcagcccgtcccggat
gaggcgggctcggaaggcggcatgatcgacatcgcctatgcgctggagctgccgctggta
gcgaccaatgacgtctacttcccgaaaccggacctttacgacgcgcatgacgcgctgatc
tgcatttccgaacgcgcctatgtcgatcagaccgcgccgcgccgccggctgacgccgcag
cattacttcaaatccgccgccgaaatggcgacgctgttcgccgacctgcccgaggcggtc
gagaacaccgtcgaaatcgctcgccgctgtgcctttgccgtcagcaagcgcaagccgatc
ctgccacgctttgccgatgacgagatcgaggagttgcgccggcaagcctgggacggcctg
cggacgcggttggcggtgatcccgcattcgaccacggtcgaggcgtatgaagagcggctg
cgctttgaactgggcatcattgagcagatgggttttcccggctatttcctgatcgtggcc
gatttcatcaaatgggccaaggaacacggcatccccgtcgggccgggccggggttcgggc
gccggctctctggttgcttatgcactgacgattaccgaccttgacccaatgcgttacagc
ctgctcttcgagcggtttctaaacccggaacgggtctcgatgccggactttgacatcgat
ttctgcatggatcgccgtgaagaggtgatccaatacgtgcaagagaaatatggccgcgac
aaggtgggccagatcatcaccttcggtgcgctgctgtccaaggcggcggtgcgcgacgtg
ggccgcgtgctgcaactaccctttggtcaggtggaccggctgtccaagatgatccctgtc
gaaggggtaaagccggtcagcgtcatcaaggcgctgacggatgagccgcgcctgcgcgaa
gccgccaaggaagaggtggtcggtcgcctgctggattatgccgcaaagatcgaagggttg
ctgcgcaacgcctcgacccacgccgcgggtgtggtgatcggcgaccggccgttggaccgg
ctggttccgctttaccgcgatccggcgtcggacatgccggcaacgcagtacaacatgaaa
tgggtcgagcaggcgggtctggtcaagttcgacttcctcggcctcaagactctgacggtc
atccagaacgcggtcgatctgatcaacgcgggcggtcgccctttgcatgtcaccgccgac
ggaaagcagctttatgagccggccagcggagcggaaaaccagatcaacgccatcccgctg
gacgacaaggcaagctacgagctgttcgccagcgcccggacggtagcggtgttccaggtt
gaaagctcgggcatgatggacgcgctgcgacgcatgaagcccacctgcatcgaggatatc
gtcgcgcttgtcgcgctctatcgcccgggcccgatggaaaacatccccacctattgcgag
gtgaagaacggcctgcgaccccttgaatccattcacccttctattgacgatattctggct
gaaacccagggcatcatcgtctatcaggaacaggtgatgcagatcgctcaggtcatgggg
ggctattctctgggcggcgccgacctactgcgccgcgccatgggcaagaagatcgccgaa
gaaatggccaaagaacgaccaaagttcgtcgaggggtgcaaagcacagggaatcgacgcg
aagaaggccggggaagtatttgaccttctagagaaattcgcaaattatggcttcaacaag
tcgcatgcggcagcctatgcggtggtcagctaccagaccgcctggctgaaggcgaaccat
ccggtcgaattcatggctgcggtgatgaactgcgatatccatctgaccgacaagcttgct
gtttacaaacgcgaagccgaccggatggggatcgagacggtgccgccctgcgtgaaccgg
tccgatgcgagtttcagcgtgcgggacggcaaggttctctatgcactgggtgcgctgaag
ggcgtcggtatcgaggcgatgaagctgattgtccaggcacgtggcgaacgcccctttgtc
gatatgcacgactttgcccgtcgcgttgatatgcggcgcgtgggcaagcgcccgcttgaa
atgctggcccgcgccggcgccttcgacatgctggattcaaaccgggcgagggtattgaag
gcgctggatgggttggtggcttggtcggcggcggtgcaggaagccgcggcctccagccag
acctcgcttttcggagggggggaggatttgcccccgccgcgcccggtcgcagcgcctgtc
tggatgcccacggaaaagctggctgaggaacatgccgcggtggggttctatctctctggt
catccgctggatgattatcagccggcgcttcgccgcaaaggggtgcagaccttggccgag
gtgacgctggcagctcaggaaggtgcgctggtggcgcagcttgcgggcacggtgtcgcaa
cggcaggagaagaaatcggcgcgcgggacccgtttcgcctttgtcggtctttccgatccg
accgggctttacgaggtcacggtgttctcggacacgctggacgcgcatcgccagcatctg
gaaccgggcgaaaacgtggtattgcaggtgcaggtggaaccgtctggcgatcaggtcaag
ctgcttgcgcgttcggtgatgccgctggatcaggcggtggccgatgccggcgcgaaccgt
ctggcggtcgagatcgcggggctggatgccgtgcccgccatcgccgaggcgctggcgcgt
atccagtccgaattcaacgcgcctgcccgtgcccgcggacccatcgcgttgcggctcaag
gatggtgcggatctggtggatatcgagattaccgaagatgcgccgctgactacaccggcc
cgccaggccttgcgcgtcatacccggcgtgctggaggtgctggaggagtga
DBGET
integrated database retrieval system
