Paracoccus methylovorus: JWJ88_19005
Help
Entry
JWJ88_19005 CDS
T08684
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pmeh
Paracoccus methylovorus
Pathway
pmeh00521
Streptomycin biosynthesis
pmeh00523
Polyketide sugar unit biosynthesis
pmeh00525
Acarbose and validamycin biosynthesis
pmeh00541
Biosynthesis of various nucleotide sugars
pmeh01055
Biosynthesis of vancomycin group antibiotics
pmeh01100
Metabolic pathways
pmeh01110
Biosynthesis of secondary metabolites
pmeh01250
Biosynthesis of nucleotide sugars
Module
pmeh_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pmeh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWJ88_19005 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWJ88_19005 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JWJ88_19005 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWJ88_19005 (rfbB)
00525 Acarbose and validamycin biosynthesis
JWJ88_19005 (rfbB)
Enzymes [BR:
pmeh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JWJ88_19005 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
QRZ15033
LinkDB
All DBs
Position
2:complement(1183829..1184866)
Genome browser
AA seq
345 aa
AA seq
DB search
MKILVTGGAGFIGSAVVRLAVARGHGVVNLDSLTYAANLENVAAVSGSPLYAFEQADIRD
RAALDRVLAGHQPDAIMHLAAESHVDRSIDGPGSFIDTNVTGTYNLLEAARAYWNARGRP
AGFRFHHISTDEVFGSLGETGQFTEATPYDPRSPYSASKAASDHLVRAWHETYGLPVVLT
NCSNNYGPFHFPEKLVPVVILNALHGRPIPVYGDGGNIRDWLYVEDHADALLLVLEKGRI
GRSYNIGGENEATNIDLVRSICGHMDRLRPDAAPHDRLISFVTDRPGHDRRYAIDPGRVR
NELGWRPSVTVEEGLRRTVEWYLENEDWWRPLLARQGVGERLGKA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctggttacgggcggcgcggggttcatcggctcggcggtggtgcggctggcg
gtggcgcgggggcacggggtggtgaacctcgattcgctgacctatgccgccaatctggaa
aacgtcgccgcggtctcgggcagtccgctttacgcctttgagcaggccgatatccgcgac
cgcgcggcgctggatcgggtgctggcagggcatcagcccgatgcgatcatgcatctggcc
gcagaaagccatgtggaccgctcgatcgacgggccgggcagtttcatcgacaccaatgtc
accggcacctataacctgctcgaggcggcgcgggcgtattggaacgcgcgcggccggccc
gcggggttccgctttcaccacatctcgaccgacgaggtgttcggttcgctgggcgagacc
ggccagtttaccgaagccacgccctatgacccgcgcagcccctattcggccagcaaggcg
gcctcggaccatctggtgcgcgcctggcacgagacctatggcctgccggtcgtgctgacc
aactgctcgaacaattacggacctttccactttccggaaaagctggtgccggtggtgatc
ctgaacgcgctgcacggccgtccgatcccggtttacggcgacggcggcaatatccgcgac
tggctctatgtcgaggatcacgccgacgcgctgctgctggtgctggaaaagggccgcatc
ggccgcagctataatatcggcggcgagaacgaggcgacaaacatcgacctggtgcgcagc
atctgcggccatatggaccggctgcgccccgatgccgcaccgcatgaccggctgatcagc
tttgtcaccgaccggcccggccatgatcgccgctatgccatcgacccgggccgggtgcgc
aatgagctgggctggcgcccctcggtcacggtggaggaggggctgcggcgcaccgtcgaa
tggtatctggagaacgaggactggtggcggccgcttctggcgcggcagggcgtgggcgaa
aggctcggcaaggcatga
DBGET
integrated database retrieval system