Poecilia mexicana (shortfin molly): 106903543 Help Entry 106903543         CDS       T08022                                  Symbol pdcd11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism pmei  Poecilia mexicana (shortfin molly) Brite KEGG Orthology (KO) [BR:pmei00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:pmei03009]     106903543 (pdcd11) Ribosome biogenesis [BR:pmei03009]  Eukaryotic type   90S particles    Other 90S particles     106903543 (pdcd11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 HAT_PRP39_N HAT_PRP39_C OB_RRP5_4th HAT_Syf1_CNRKL1_N Spt6_S1 Suf TPR_14 HAT_Syf1_CNRKL1_C TPR_19 UTP6_C TPR_16 NRDE-2 TPR_CcmH_CycH TPR_8 ARM_TT21 ARM_TT21_N TPR_15 ARM_TT21_5th HAT_Syf1_M Motif Other DBs NCBI-GeneID:  106903543 NCBI-ProteinID:  XP_014822913 LinkDB All DBs Position Unknown AA seq 1804 aa AA seqDB search MASVEEDFPRGGKTKKSTDSKVTVERTKVDNLFQQSDEQTTTKKKKGGNTKVKKQKTEEQ EGGLTLNAAANIVEILHIKNVREGMLLLGCVKEVADFEVTVSLPCGLQGFLSIRNVCEAY TKLLSEQLDSDVENEEFCSLSQIFWPGMLLRCVVSKMDITKGGSLSIQLSVNPKLVNKSL TSSSLTPGMVLSGCVESVEDHGTIIDIGVSGTKAFLPEDATQSKQHKSDELKVGQYVTSR VEEVKNDGRVVRLSAAARASANAKQGWTLTNLLPGLTVKATIKKVTKHGLHLDFLNSFSG QVDFLHMEPESSYREGFQVQACVLYIEPTARLVGLSLRSHLLQPMSDINAAPPGGDRTGE VVNECKVTTMHHMSGAMLELPDKTPAFVHRNHLKEPSDPANDNKVSAMPKHTCRILDFSP VEQIYFASLRKSVIDQRFYRYQDIHAGQVVEGTVSVLLSHGMVLHLSEHVKGLVPRTHLS DIILKNPEKKYIEGMKVKCRVLSVDVDNRKLCLTRKKALVESTLPLFLSYDDARPGRVSH GFIVSIKDFGCIIRFYGNVKGLVPLEELSSEPIVRPEDVFYIGQVLKAKVLQCEPQKEKL LLSFKAAAEGEMEESTEPPIDCEVGKGVEARVVKKSVNGLEVVILPDEGRAVLPTVHLSD HMSNCQLLWEVLQEGDTVSDLICFNKNKQNITLTKKPRVRSSLEEGAVAKDFSEVTVGMQ LVGCIRSIMSYGVFVEFPYGLVGLAPKSAMSDKFISDTTTAFEPGQTVIAKVTNVDEEKR RFLVTLKTSEVITSDGDARAALLNGVQERRAVKEMLTIRDDGELRRQLAALTVGQKLKLT VDSATQDGAKFKSDNLPGADVVASKRHVAGVSLTPGQKVNAVVLNVDILSTCVHVSVLPK LLGKKKSLNKGSDCWAVVQFVDRDFTVVSLNDAAQLTLLQTCGHPNEVTLSGADRLKAGM TLTVEVVEPSCEQLEGLPLVLWKGSARKRQRTASENQADSSGHRFGEVLQGKVRSVKPTY IQVALEDGSMGSVHVSQVVEPAAVKMGSFPTSTVRVGSTVKARVIGGREATSHRFLPFSH PKFKYTIPELTLIPSRLDPGVDFKPVTAKDKLSGYKAGDEITCFVSKFKSDKKCLEVTSD PCLTGTVDLLSMITDPKDASHPEKLFKLGQAVRAKVVEASVQPHRFVLSLSGIHKLEKGS ITLGMVTSVHPQVGLVVKLPFGGAGAVSITDVADTYRKNPLEAFSKDQLIRCYLLDVQNG KWHLSLRPSRLNAQNTKPAKDPEVLSLDHLRLDQVVRGYVKSVSEQGIFIRLSHNITGRA RLQQSSKYFINNHKILSSHLPVNTLLTTKILSVDREDELVDLSLLPADTGKPDVLPESLG LPLRLVGDVEKRDSKKAKKRSHCESEQKPAEPQVPKKKTKKSSTSKTDADDSGVEVYFRE EDEGEEAKRDSAQVPPSSAGPSRLQVPTGFSWDVGLSSLKPVLEAKDGDSSDGEEQDGNE KPQKKTRHELEQEKKSAEKALLQREAELMDPSLRPQDAAAFERLLLASPSSSLLWLQYMA HHLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENMYGTQESLKKVFERAVQF CEPMPVYQQLADIYANSNKIKEAESLYKTMVKRFRQNKAVWLSYGTFLLQQGQSDAASSL LQRALKSLPPKESVDVITKFAQMEFRFGDAERGRSMFDKVLTSYPKRTDLWSVFIDLMVK HGSQKEVRAVFDRTIHLSVSVKKIKFFFKRYLEYEKKHGTPQSVQAVKEKAMEFVEAKGK DAAN NT seq 5415 nt NT seq  +upstreamnt  +downstreamnt atggcgtcggtagaggaggattttcctcgtggaggcaaaacaaagaagtccaccgacagt aaagtcacggtggaacggactaaagtggacaacctgtttcagcagtcagatgaacaaacg acaacaaagaaaaaaaagggaggcaacacgaaagtcaaaaagcaaaagacagaagagcaa gaaggtggcctgacgctcaacgctgctgctaacatcgtggagattctgcacataaagaac gtgagagaggggatgctgttactgggctgtgtgaaggaggtggctgacttcgaggtgacc gtcagccttccttgtggcctgcaaggcttcctcagcatcaggaacgtctgtgaggcctac accaagctgctgagcgagcagctggactcggacgttgaaaacgaggagttctgctctttg tcccaaatcttctggccgggaatgctgctccgatgcgtggtttccaaaatggacatcact aaaggaggctcgctcagcattcagctgtctgtcaatccaaagctggtcaacaagagcctc acctcgagctctctgacgcctggaatggtcctgagtgggtgcgtggagagtgtcgaagat catggcactataattgacattggtgtgagtggaacaaaagccttcctgcccgaggatgct acacagagcaaacagcataaaagtgacgagcttaaagtgggtcagtatgtgacttctcgg gtggaggaagtaaagaacgacggccgcgtcgtccggctctccgcggcggctcgggcctcc gctaacgccaaacagggctggaccctcaccaacctcctgccgggcctcacggtcaaagct accatcaaaaaggtgaccaaacatggcctgcacctggacttcctgaactcgttcagcggc caggtggattttctgcacatggagccggagtccagctacagagaggggtttcaggtgcaa gcgtgcgttctgtacattgagccgaccgcccgcctcgtcgggctgagcctgcgcagccac ctcctgcagcccatgtccgacatcaacgccgctcctcccggcggggaccggaccggagag gtggtgaatgagtgcaaggtgaccacgatgcaccacatgtcgggggccatgttggagctg ccggacaaaaccccggcctttgtgcataggaaccacctgaaggagccaagcgacccggcc aatgataacaaggtctctgcgatgcccaagcacacctgcaggatcctggacttcagcccc gtggagcaaatttattttgccagtttacgaaagagtgtgattgatcagcgattttataga taccaggacattcacgccggccaagtcgtagaggggacggtgtctgtcctgctgagccac gggatggtgctgcacctgtcggagcacgtcaaaggcctggtgcctcggacgcacctctct gacatcatcctgaaaaacccggagaagaagtacatcgagggaatgaaggtcaaatgtcgg gtgctgtcggtcgacgtggacaacaggaagctgtgtctgacccggaagaaggcgctggtc gagagcaccctgccgctgttcctcagctacgacgacgcccgtcccggccgcgtgtcccac ggcttcatcgtgtctatcaaagacttcggctgcatcatccgtttctacggcaacgtcaaa ggtcttgtcccactggaggagctcagctctgagcccatcgtccgtccagaggacgtcttc tacattggacaggtgttgaaggccaaagttctccaatgtgagccacagaaggagaagctg ctgctgtcatttaaggcggcggcagagggagagatggaggaatctaccgagcctccgatt gactgcgaggttggaaagggggtggaggcaagggtggtgaagaaatccgtcaacggcctg gaggtcgtcatcctcccagacgagggccgcgccgtcttacccacagtgcatctctccgat cacatgtccaactgtcagttactgtgggaggttctgcaggaaggagacaccgtctcagac ctgatctgctttaacaagaacaagcagaacatcacgctcaccaagaagccaagggtgaga tcgtcactggaggaaggagcggtggccaaagatttctctgaggtaaccgtggggatgcag ctggtcggctgcatcaggagcatcatgtcctacggcgtctttgtggagttcccctacggg ctcgttggtcttgcacccaaatctgccatgtcggataagttcatcagtgacacgacgacc gcctttgagccgggccagacggtcatcgccaaggtgaccaacgtggacgaggaaaagcgg cgattcctggtcacgctgaagacctccgaggtcataacgtctgacggggacgcccgggcc gcgctcctgaacggcgtacaggagaggcgagctgtgaaggaaatgctgaccatcagagat gacggtgaactccggcggcagttggccgctctgaccgtcggccagaagctgaagctgacg gtggattcagcgacacaggacggggccaaattcaagtctgacaacttgcctggtgctgac gttgtcgccagtaaacgccatgtggcgggagttagcctgacccctgggcagaaagtgaat gcggtcgtccttaatgtcgacatcctgtccacctgtgtccatgtttccgtcctcccaaag ctgctggggaagaagaagtctctgaataaaggctcagactgctgggcggtggtgcagttc gtcgaccgggactttaccgttgtctcgctaaacgacgcggcgcagctgactctgctccaa acctgcggccacccgaacgaggtcaccctgtccggggcagacagactcaaggcggggatg actctgacggtggaagtcgtagaacccagctgcgagcaactggaagggctccccctggtg ttgtggaagggcagcgcccggaagcggcagcgcacggcttcggagaaccaggccgactct tcgggacaccgcttcggcgaagtcctgcagggcaaagtgaggtcggtgaagcccacctac atccaggtggcgctggaggacgggagcatgggcagcgtccacgtgtcgcaggtggtggag ccggccgcggtcaagatggggtccttccccacgtccacggtgagagtgggcagcacggtc aaagccagggtcatcggaggacgagaagccaccagtcacagatttcttccgttttctcat cccaaattcaagtacaccattcctgaactcacacttatccccagccgactggatcctggt gtggatttcaagccagttacagcaaaagataagctctccggctataaggccggcgacgaa atcacatgtttcgtatcaaaatttaaatcagacaagaagtgcctggaagtcacctctgac ccctgcctcacagggaccgtggacctgctttccatgatcacagatcctaaagatgccagc cacccagaaaaactgttcaagctgggccaggcggtccgcgctaaagtggtggaagcgagc gtccagcctcatcgctttgtgctgtcgctctcagggatccataaactggagaaaggcagc attactttgggaatggtgaccagtgtccacccacaagtcggcctcgtggtcaagctcccc ttcggcggcgccggagcggtttctatcactgacgtcgctgacacctacaggaaaaacccg ctggaggcgttcagcaaggatcagctcatcaggtgttaccttctagatgtgcagaacgga aagtggcacctgtccctacgtccatcgcggctgaacgcacagaacaccaagccggcgaag gacccagaagtcctgtctttggaccatctgcgcttggaccaggtggtccggggttacgtg aagtctgtgagtgagcaggggatcttcatcaggctgtcgcacaatatcacaggaagagct cgacttcaacagtcctccaaatacttcattaacaaccacaagatcctctccagtcacctt ccggtcaacaccctcctcaccactaaaatcctcagtgtggacagggaggacgagttagtc gacctctctcttctccccgcggacaccggaaagccagacgtgctcccggagtccctcggc ctgccgctgcgtctcgtcggagacgtggagaaacgcgactcaaagaaggcaaagaaacgc tcgcactgcgagagcgaacagaaaccagcagagccccaggtcccgaagaagaaaacaaag aaatcgagcacatcaaaaactgacgccgatgacagcggagtggaggtctacttcagggaa gaggacgagggtgaggaagcaaagcgtgattctgctcaggtgcctcccagctcagcgggt ccgtccaggctgcaggtgccgaccggcttctcctgggatgtggggctgagctccctgaag cccgtgttggaggcaaaggacggggactccagcgacggagaggagcaagacggaaacgag aagccccagaagaagacgcgccacgagctcgagcaggagaagaagtcggcggagaaggcc ctgctgcagcgggaagccgagctgatggacccgagcctgcggccccaggacgcggccgcc ttcgagcggctgctgctcgcctcgcccagcagctcgctgctctggctccagtacatggcc caccacctgcaggccacgcagatcgagcaggcccgggccgtggccgagagggccctcaaa accatctccttcagggaggagcaggagaagctgaacgtgtgggtggccctgctgaacctg gagaacatgtacggaacccaggagagtctgaagaaagtgtttgagcgagccgtgcagttc tgtgagcccatgcccgtgtaccagcagctggccgacatctacgccaactccaacaaaatc aaggaggcagagagcctatataagaccatggtgaaacgtttccggcagaacaaagcagtg tggttaagctacgggaccttcctgctccagcagggccaaagtgacgctgccagctctctc ctgcagagggcgctgaagagtctgccccccaaagagagtgtggatgtaatcaccaagttc gctcagatggagttccgcttcggtgacgccgagagaggtcgcagcatgttcgacaaagtc ctgacgagctatccgaaacgcacggacctctggtccgttttcatcgacctcatggtcaaa cacggatcgcagaaggaagtgagggccgtcttcgatcggacgatccacctcagcgtttcc gtgaagaagatcaagttcttcttcaagcgctacctggagtatgagaagaagcacggcaca cctcagagcgtccaggcggtcaaagagaaggccatggagttcgtggaggcaaaaggcaaa gacgctgcaaactga

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