Poecilia mexicana (shortfin molly): 106903544
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Entry
106903544 CDS
T08022
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106903544 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106903544 (taf5)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106903544 (taf5)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106903544 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
106903544 (taf5)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106903544 (taf5)
STAGA complex
106903544 (taf5)
TFTC complex
106903544 (taf5)
SAGA complex
106903544 (taf5)
SLIK complex
106903544 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
VPS8_N
CDK5RAP3
LisH
Beta-prop_WDR11_2nd
LisH_PAC1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
106903544
NCBI-ProteinID:
XP_014822915
Ensembl:
ENSPMEG00000018255
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MAAVQGSIVDAKDEADIKTEPATDGFGNNHANDAGVLSASPGSSAAAGNNKPAAGAPEDQ
QTLLAVLQFLRKNKLSESAEILRREAGLPEEALDPKGADSAGSGLGSGADVDGGDASALL
SRVTVSAPGGAKAPTKAGEDQPDVNVVLSAYSQQGDPALYEVYYSGLKKFIESVLDCHRA
ELSQVFYPLFVHMYLELVYNNHEGEAKAFFEKFSGDQECYYEEDLRILSSLTKKEHMRGN
ETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKSQIDA
MSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSTGSKS
KKQDPNAPSQTRIPLPELKDSDKLDKIMYMKESTKRIRLGPDNLPSICFYTFLNAYQGLT
AVDVTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTAADLNLIDKESDDVLERIMDDKTAS
ESKCLYGHSGPVYGISFSPDRNYLLSCSEDGTVRLWSLLTFTCLVGYKGHNYPVWDTQFS
PYGYYFISGGHDRVARLWVTDHHQPLRIFAGHLADVTCTRFHPNANYVATGSSDRTIRLW
DVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGHTECI
YSLRFSRDGEILGSGSMDNTVRLWDATKAFDDLETDDFTAATGHIHLQDNSQELLLGTYM
TKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggtagtatagtcgacgcgaaagacgaagccgacattaaaacagaa
ccagcgaccgatggcttcggaaataatcacgccaacgacgcgggagtgctctctgcatcc
cccggctccagcgctgcggctggaaacaacaagccggcggcgggagcccctgaggaccag
cagaccctgctggctgtgctgcagttcctcagaaagaacaaactgtcagagtccgcggaa
attctgcgtcgcgaggcgggattgccggaggaggctctggatccaaagggggctgactcc
gccggttctgggctgggaagtggtgcggacgtagacggtggggatgcgagcgctttgctc
agccgggtgaccgtctctgctcccggcggagctaaggcgccaaccaaagctggggaggat
cagccagacgtcaacgtggttctgtcagcctacagccagcagggagacccagctctatat
gaagtttactacagcggtctgaagaagttcatcgagtcggttctggactgccacagagca
gaactgtctcaggtcttctaccctctgtttgtccacatgtacctggaactggtctacaac
aatcatgaaggcgaggctaaggccttctttgaaaagttcagcggggaccaggagtgctac
tatgaagaggacctacgcattttgtcaagccttacgaagaaggagcacatgagagggaac
gagacgctgctggatttccgcaccagcaagttcgttttgcgcatctcccgcgactcctac
cagctgctgaagaggcacctgcaggagcgccagaacaaccagatatggaatatcatccaa
gagcacctctacatcgacatcttcgatggcatgccgcgcagcaagagccagatcgacgcc
atgtccggcagcttggctggagaggccaaacgagaagcaaataaggccaaggtttactat
ggcctgctgaaggagccagaaatcgagcttccccttgatgatgaggatgaggaagcagag
aacgaggaaggtaaacccaagaagaaaaagcccaaaaaggacagcaccggctccaaaagc
aagaagcaggatccaaacgctccttcacagaccagaatacctctaccagaactaaaagac
tcagacaagctggacaagatcatgtacatgaaggagtccaccaagagaattcgtttggga
cctgacaacctgccctccatctgcttctacacctttctcaacgcataccagggtctaact
gcggttgacgtaacggacgactccagtctgatcgcagggggcttcgctgactccacggta
cgggtgtggagcgtcacgccgaagaagctccgcaaggtcaagaccgccgcagatttgaat
ctgattgacaaagagtcagatgatgttcttgagaggattatggacgataagacggccagt
gagtcaaagtgcctctatggacacagcggaccggtgtatggcatcagcttcagcccagac
agaaactacttgctgtcatgctctgaagacggcacggtcaggttgtggagcctcctgacc
ttcacctgtctggtgggatacaaaggccacaactatccagtgtgggacacgcagttctcc
ccttacggatattatttcatctccggggggcacgaccgggtcgcccgcttgtgggtgact
gatcaccaccagccgctgcggatattcgccggtcacctggccgacgtcacttgcactcgc
ttccaccccaacgcaaattacgtggccacaggctcgtctgaccgcaccatccgtctgtgg
gacgtcctcaccggaaactgtgtccgtattttcaccggtcacaagggtcccatccacgcg
ttggcgttctctcctaatgggaagtttttggcctcaggagccactgatggcagagtcctc
ctgtgggacattggtcacggactgatggtcggagagctcaagggtcacacagagtgcatc
tactccctcagattcagcagggatggagagatcctcggctccggttctatggacaacacg
gttcgcctgtgggatgcgacgaaagcatttgacgatttagaaacggatgacttcactgcg
gctacgggacacatccacctgcaggataactcccaggagcttctgctggggacctacatg
accaaatcgacgcctgtagttcaccttcacttcacacggaggaacctgcttctggccgca
ggagcttataatccatag
DBGET
integrated database retrieval system
