Poecilia mexicana (shortfin molly): 106903969
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Entry
106903969 CDS
T08022
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04270
Vascular smooth muscle contraction
pmei04625
C-type lectin receptor signaling pathway
pmei04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106903969
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106903969
09153 Circulatory system
04270 Vascular smooth muscle contraction
106903969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106903969
Membrane trafficking [BR:
pmei04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106903969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
106903969
NCBI-ProteinID:
XP_014823504
LinkDB
All DBs
Position
Unknown
AA seq
1345 aa
AA seq
DB search
MNVVILVPNQTESTGLSGPRAFSQTKTQRMGNPLKHEFDPTGLVQRCVIIQRDKNGFGLT
VSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTRSNHKEVVKLIKSGSYVALTVL
GRPPGLSQMPLEETQEQEEHEEVSMPLPLSTPNSPALSGAERSSFLSGSPQNHNNCTLSD
GVKPQTRVPRDSTQEGTSGSRIRDEDERDDGTLLKEQTGEEVSPTNSSATHSTPVPEASG
KRESPLQSPDVSRQDDLNFCSSPDTEDAPDTDSSPHSSVASPPYTLNPQIIGAEDDYFDY
QQEQINGECSCFQSIDLLKSRPAHLAVFLHHVVSQFEAAPLLCYLYAEMHKQTSSKESRR
FFMEFHSLFLDRTSNLKVPVPETIASELEKRRLELIPEDLCKQYTQVLQDSLLSDLLKNL
EDFRQKRSMGLTLAEDELSKLDLERGTDQPALEKECACAEHILAKIEDILPTTQASEEEK
CQAMQYVILTYMKHLGVKVKEPRGLEQKRARITFLPKIKRGSKPEKDGDWKKPRFPNILV
PPRRLSRVDSTLVVKSVELNKQRSPKFSQPAFVIPEPADHPASNPGRSRANQLSQGSDTS
TQSTISVASLDPSSADSTGQETDSSVSPFGIQSRLSDGLQAGEHQDGLSSPISTQFDFSP
SGLDHREDDQDAFRMEIQPTVGSADFQSEDDHAGEVESEEDPLNWQKLVPRGVLASLTSK
EINRQEVINELFITERAHLRKLRVLDGVFCQRLSRHGILPPDDIKRIFINLEEIIQLHFS
ITEQMAAVRKRSETSVIGQIGDDLLAWFSEEEEEKIKKATGTFCSNQPYALELIKTRQKK
NQRFNLFMQEAESNRLCRRLQLKDIIPVEMQRMTKYPLLLDNIAQYTEDGEEKEKVKKAG
ECCKKILNHVNQAVKEAENKQRLVDYQRRLDVSSLKQIENPMILELRNLDLTKREMVYEG
PLSWKVNKDKTIELYTLLLEDIMVLLQKQDERLVLKFHGKNLTSIPDAKHSFSPVIKLST
VLVRPVATDNKAFFVLSMSENGVQMYELMAQKVSDRRTWQCLITQCADAMKAKAHPSDRP
PAQAEAERVAVEILNQEMPKQSETLTETIHSADKDAPCSPDVQSPINPFDGLKSEDEEEE
LPATVRQEENGEEEEVDEAELEAFLDGQLTDRLLQEGSRQGIALPVEDMESNFPSSKAEE
ALRTLAMLKEMLYSHMMSREVEKETEENKPSSAGPENNDLQLCSGLTGVSESAQPNGGFA
GLDFEAGSGESSTDDDVAIDMRKLLSSSSQAGGDGPDLSRQLMTHLRLLQADLQYLQEVE
LKYNELQQIHNNRSTDSDDNNEGLQ
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtgattctggtccccaatcaaactgagtccactggactatcaggacccaga
gcattctcacagacaaaaacacaaagaatgggaaatcctcttaaacacgagtttgaccca
acaggtctggtccagcgctgtgtgattatccaaagagataaaaatggctttggtctgaca
gttagtggagacaaccctgtatttgtgcagctggtgaaggaagatggagctgcaatgaga
gccggtgtccaaacaggagaccggatcattaaggttaacgggactttagttactcgttca
aaccacaaagaggttgtgaagttaataaaatcgggttcctatgtagcgctgacggtgcta
gggaggcctccaggcctttcccaaatgcccctggaggagacacaggagcaggaagaacac
gaagaagtcagcatgcctcttcctctttcaacccccaactcacctgcactgtccggcgca
gagcggagcagctttttgagtgggagcccccagaaccacaataactgcactctgtctgat
ggtgtaaaaccacagaccagagtacccagagacagtactcaggaagggacatcagggtcc
aggattcgtgatgaagacgagcgagatgatgggactctcctgaaggaacagaccggtgaa
gaagtgtcgccaaccaacagcagtgctacacacagcactcccgttccagaggcgtctgga
aaaagagagtcgccacttcagagtccagacgttagccgacaggatgacctgaatttctgc
tcgtcccctgacactgaagacgctcctgacactgactccagtcctcattcttctgtggca
agccctccatacaccctaaacccccagataattggagcggaggacgactactttgactat
caacaagaacagattaacggcgagtgcagctgttttcagagtattgacttgcttaagtct
cgaccggctcatctggctgtcttcctccatcatgtggtgtcccagttcgaggctgctcct
ctgctttgttatctctacgcagaaatgcacaaacaaaccagctccaaggagagtcggcgc
ttctttatggagttccactccctcttcttagatagaacatcaaatctaaaagtaccagtt
cctgaaacaatagcatcagaattagaaaagcgacgactggagctgatcccagaggatctg
tgtaaacaatacactcaggtgttacaagactctcttctgtcagacctgctcaagaacctg
gaggacttcagacagaagcgcagcatgggtctgaccctggctgaagacgagctgtccaaa
ctggacttggagcgggggacggaccagccggcgctggagaaggaatgcgcctgtgcagaa
cacatcctcgccaagattgaggatatcctgcccacgactcaagcctcagaagaggagaag
tgccaagctatgcagtatgtgattctgacctacatgaagcatcttggggtgaaagtgaag
gagcctcgcggccttgaacaaaaacgtgcacgcatcaccttcctgcctaagattaagaga
ggaagcaaacctgaaaaagatggtgattggaagaagcctcggtttcccaacatccttgtt
cctcctcgacgtttgagcagagtagactccactttggtggttaagtctgtggagctcaat
aagcagcgctctccaaagttctctcagccagcctttgttatccctgaaccagccgaccat
cctgcctcgaaccctggacgcagccgagcgaatcagctcagccaggggtcggacaccagt
acccagtccaccatctctgtcgcctccctggatcccagctccgccgactcgactggacaa
gaaacagactccagtgtctctccatttggcatccagtcgagactcagtgacggtctgcag
gctggagaacaccaggacggcctctctagtccaatcagcactcagtttgacttcagcccg
tccggtcttgaccaccgagaggacgaccaggatgccttcaggatggaaattcagcccacg
gtgggttcagctgacttccagagcgaggacgaccatgcaggagaggtggagagtgaggag
gaccctctgaactggcagaaactcgtccctcgaggcgtcttggcaagtctcacttcaaag
gagatcaatcggcaggaagtcatcaacgagctgttcatcactgagcgcgctcacctgcgt
aagctgcgggtgctggacggcgtcttctgccagagactgagtagacacggcatccttccg
cctgatgacataaagcgcatcttcattaacctggaggaaatcattcagctgcatttttca
ataacggagcaaatggccgccgtcaggaagaggagtgagacctctgtgattggtcagatt
ggagatgatctcctggcatggttcagcgaggaggaagaggagaagataaaaaaagcgaca
ggaacgttctgcagcaaccagccgtatgccctggagctcatcaagaccaggcagaaaaaa
aaccagaggttcaacctattcatgcaggaagctgagagcaaccgcttgtgtcgcaggctg
cagctaaaagacataattcctgtagaaatgcaaagaatgacaaagtacccgctcctactg
gacaatattgcacaatacactgaggatggtgaagagaaggaaaaggtgaagaaagctgga
gaatgctgcaagaagatcctgaaccacgtcaaccaggccgtgaaagaggctgaaaacaaa
cagagactagtggattatcagcgaaggcttgacgtctcgtctctgaaacaaattgaaaac
cccatgatcctggagctcaggaatctggatttgaccaagagggagatggtatatgagggc
ccgctctcctggaaagtcaataaagacaagaccattgagctctacacacttcttttggag
gacatcatggttctacttcagaaacaggatgagcgtttggttctcaagttccatgggaag
aacctgaccagcattccggacgccaagcatagtttcagccctgtcatcaagctcagcact
gtcctggttcgtcctgtagcaaccgacaacaaggccttctttgtcctgtccatgtcagag
aatggggtccagatgtacgagctaatggcgcaaaaggtgtccgacaggagaacgtggcag
tgtctaatcacgcagtgcgctgacgccatgaaggccaaagctcaccccagcgacaggcct
ccagctcaggcagaagccgaacgggttgcagttgagatcctgaaccaagagatgcccaaa
cagagcgagacgctgactgaaaccatacattcagctgacaaagacgctccatgttctcct
gatgttcaatctcccatcaacccctttgatggcttgaaatcagaagatgaggaagaggag
ctgccggctactgtcaggcaggaggaaaatggggaagaagaggaggtggacgaagctgag
ttggaggccttcctggatggccagctgaccgacagactcctacaggaaggatcccgccag
ggcatcgctcttccggttgaggacatggagtcaaactttccctcctccaaagctgaagag
gctctgcggactctggccatgctgaaggagatgctttactcccacatgatgagcagagaa
gtagagaaggagacagaagagaacaaaccgtcttctgcaggaccagagaacaacgacctg
cagctctgctctggcctcaccggggtgtctgagtcagcacaacctaatggtggttttgcg
ggtctggactttgaagccggttctggggagagcagcaccgacgacgatgtcgcaattgac
atgaggaagctgctgtcctcctcctcacaggcagggggcgacggtcctgatctgagcagg
cagttgatgacccacctgcgtctcctgcaggctgacctgcagtacctgcaggaagtagag
ctgaagtacaacgaactgcagcaaatccacaacaacagatctacagactcagatgataac
aacgagggactgcagtga
DBGET
integrated database retrieval system
