Poecilia mexicana (shortfin molly): 106904441
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Entry
106904441 CDS
T08022
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmei03009
]
106904441 (ddx10)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106904441 (ddx10)
Ribosome biogenesis [BR:
pmei03009
]
Eukaryotic type
90S particles
Helicases
106904441 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
106904441
NCBI-ProteinID:
XP_014824268
Ensembl:
ENSPMEG00000004541
UniProt:
A0A3B3WKT4
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MKEKNKSSSRRKPKTSQTRGSADPVKCFEKWKNKYMKGRDRVKQRRMQRKKPEWQLEREY
IKSLVSRYGDINTTDVCKFSDFPISKKTLLGLQEAQYRQPTEIQRQTIGFALRGRDVLGA
AKTGSGKTLAFLVPVLECLYRQQWSSMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSA
GLVIGGKDLKSESERISRTNIVICTPGRLLQHMDETASFHASSLHMLVLDEADRILDMGF
ADTLNAIVDNLPKSRQTLLFSATQTRSVKDLARLSLKDPEFVWVHEKAKFSTPATLEQSY
MVCELHHKVNMLYSFIRSHLKKKIIVFFACCKEVQYLFRAFCRLRPGIPILALHGKQQQM
KRVEVYNNFVKKQSAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKAMLAQLQEKKVPINQIQVNPEKVQCVQQKLEAFLAQETEQKERAQRC
FVSYLRSVHLMKNKQVFDIFELPIRQYALSLGLAVCPRVRFLSKAHAQKAEDEDEDESDE
EEELQSFRVQLSKKVPCGVVEHDTEENVDKSSKALHGDISEDEDDLRDLELLTVKRKDVF
ELSGDPECVEDTSQGPNNTRKETKFKKTKKLLKRNFQINTKTTFNEEGEAVQLWPPVQQT
VTAEDEEDDVLGINVAKARDRLRREDQEFDKQEYRRKVQAEHRNKRLKAKEARREASKRQ
RRSDEENTAYLACHSGGEFDSSILPDPDQLHSSDEEEEGYAKKQHSCNKEPDKKERKGKQ
LNDEQIGLDTGLSLADDEELVLHLLRGPK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaaacaagagttccagtagaaggaaaccaaaaacctctcagacaagaggg
agcgctgatccagtaaaatgcttcgagaagtggaagaacaagtacatgaaggggagagac
cgtgtgaaacaaaggagaatgcagagaaaaaaacccgagtggcaactagaaagggaatat
atcaaaagtctggtgagcagatatggtgacatcaacacgacggacgtttgtaagttttcg
gactttccaatctcgaagaagaccctgttgggtctacaggaggctcagtatcgccagccc
acagaaatccagagacagacgatcggcttcgctctgcgtggcagagatgtccttggtgct
gcgaagactggttccggaaaaactttagccttcctcgttccggtgcttgagtgtctgtat
cgtcagcagtggagctcaatggacggtctcggtgtcctcatcatatcaccaaccagagaa
ctcgcctatcaaaccttcgaagttctccgcaaagtaggcaaaaatcacgagttttccgca
gggctcgtcatcgggggtaaggaccttaagagcgagtcagagcggatatcccgcaccaac
attgtgatatgcacaccggggcgactgctgcaacacatggacgagacggcctccttccat
gctagcagcttgcacatgcttgtcctcgacgaggcggaccgcatcctggacatgggcttt
gcagacacgctcaatgccatagtggataatctgcccaagtcacgacagaccctgctgttt
tccgccacacagaccaggagtgtgaaagatctggcccgtcttagtctcaaggatccagag
tttgtgtgggttcatgagaaagccaagttcagcacgccagccaccttggagcagagctac
atggtgtgtgagttgcaccacaaagtgaacatgctctattcttttattagaagccacctg
aagaagaagattattgtgttctttgcctgctgcaaagaggttcagtatctgtttcgagcc
ttctgtcgtctaagacctgggattcccatcctggcgctgcatggcaagcagcagcaaatg
aagagggtggaggtctacaacaattttgtcaagaagcagagtgctgtcctatttgccaca
gatattgctgctagaggcctggacttccctgctgtcaattgggtgctgcagtttgactgt
ccagaggatgcagacacctacatccacagggtaggccgcacagctaggtacaaggagggt
ggagaagctctgctgctcttgctgccctctgaagagaaagccatgctggcccagctgcag
gagaagaaggttcccatcaatcagatccaagtgaatccagaaaaagtgcagtgtgtgcag
cagaagctggaggccttcctggcccaggagacggagcagaaagaaagagcccagaggtgc
tttgtttcttacctgcgctcagtccatctaatgaaaaacaaacaagtctttgacatcttt
gagctgccgattaggcagtatgctctatctctgggccttgctgtttgccctagggtgcgc
ttcctcagtaaagcccatgcacagaaagctgaggatgaggatgaggatgagtctgatgaa
gaggaagaactccagagctttagagttcagctgagtaagaaagtgccctgtggagttgtt
gaacacgacacagaagaaaatgtggacaagtcctcaaaagcacttcatggtgacattagt
gaagatgaagatgatcttcgagacttggaactgctgactgtcaaaagaaaggatgtcttt
gagctgtcgggggacccagagtgtgtggaggacacttcccaaggcccaaataacaccaga
aaagaaacaaagttcaaaaagaccaaaaagctcttaaagagaaacttccaaatcaatacc
aaaactacttttaatgaagaaggagaagctgtgcaactttggcccccagtgcagcaaaca
gtaactgctgaggatgaggaagacgatgttttaggcatcaatgtggcaaaggccagagac
aggcttagacgtgaagaccaggagtttgacaagcaagagtacagacgcaaggttcaagct
gaacacaggaataagaggctcaaggccaaagaggccaggagggaggcaagtaagcggcaa
cgaaggtctgatgaggaaaatacagcatacttggcctgtcacagcgggggggagtttgac
tccagcatcttgccagaccctgatcagttgcactcatcagatgaagaggaagagggttat
gctaaaaaacaacacagctgcaacaaagagcctgacaagaaagaaaggaaaggaaagcag
ctgaatgatgagcagattggcctggacactggcctttcactggctgacgatgaggagctg
gttttacatctgctgcgtggaccaaagtag
DBGET
integrated database retrieval system
