Poecilia mexicana (shortfin molly): 106905153 Help Entry 106905153         CDS       T08022                                  Name (RefSeq) collagen alpha-1(XII) chain-like   KO K08132   collagen type XII alpha Organism pmei  Poecilia mexicana (shortfin molly) Brite KEGG Orthology (KO) [BR:pmei00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:pmei00535]     106905153 Proteoglycans [BR:pmei00535]  Extracellular matrix (ECM) proteoglycans   Others    106905153 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 VWA Pur_ac_phosph_N Ig_DSCAM-DSCAML_C Collagen VWA_2 Motif Other DBs NCBI-GeneID:  106905153 NCBI-ProteinID:  XP_014825272 LinkDB All DBs Position Unknown AA seq 2096 aa AA seqDB search MRVSWEAAAGASGYLLLYRSINASEPQEEQEVRVAGGVTNTQLLQLIPNTQYAVTLIALH GEATSEALEGRGVTLPLSPAGELRISDVTHSSMMLNWDAAPGAVRRYMITYKPDGGELKE VEVNGDVTTLQLTSLISQTEYDVAVTPVYDEGPAAPMLGTAITDTVPAPKNLQFSEVTQN SFRATWEHGAPDVALFRISWTRKGEKDPKNEILNNDENSYVLENLDPDTEYLVTVTAIYP DESESEDLIGAERTLLKAPDVRPEPPRNLRVFNATVSSLTVKWDAAPGPVKNYKVTYLPV AGGEPQTLQVGGKKTNVILQQLQPDTPYSVTVAAVYPSGASRDIKGEGKTKPLGSVRNLQ VLNPTMTTLNVRWEPAEGRVSEYKVIYAPAAGGAESMVGLETVSAGTTATILRGLQPDTL YSVTLVPVYAEGDGKRMSENGKTRALGGVKNLMVSDPTMTSLNVRWDPADSAVRLYKVFY VPAAGGREEMEQVPSGTTATVLRNLQPDTLYTVSVVPVYPAREGRRQSEDGKTLPLSGVS GMRVSNPTITTLTVNWDAADGNVQGYKVIYVPANGGLEIVEQVSESTTSTILQKLLPDTS YTVTVVPVYAEGDGPSLTDTGKTRPLGSVRNLRVTDPTTSTLNVRWEPPEGNVREYVVTW VPTAGGEEEMDQVPGTVSSTVLKQLQPDTEYSVTVVPVYPEMEGKSMSETGKTNPLGGVK NLKVVDPSISTLTVRWDPAVGNVRTYKVFYAAQPGGQQEVEEVSGGTTTTVLRNLQADTL YSVAVVPVYPDVEGIRQEDQGRTKPLGGVRNLQVTDPTTSSLRVRWEPAEGDVRQYRVLY APAAGGPESAMQVSGLTTSTVLTELSPDTEYRVTVVPVYEDVEGNRMSENGKTKVLGGVK NLQVTDPTTSSLRVRWEAAEGNVRQYRIFYIPAAGGAEDMEQVSGGTTDTVLRNLLSDTP YTVTVVPVYPEGEGLRQADRGKTLPRTPPRNIQVYNPTPSSLNVRWEAASGRVQQYRVAY APLSGARAAESVLVPGSITNAYLDNLIPDTPYAITVTALYADAEGASVKGDGKTLPRAGP RKMRVYDATTSSLTIGWDHAEGPVRQYRIAYAPMTGDPITEFTMVPGNRNNAMLPSLLPD TPYNITVEAIYAEGPGGSLNGNGRTIGMLSPRNLRVSDEWYTRFRVSWEPVSAPVQGYRL IYSPQGKDQPVDFFVGDVTSFTLTNLEPGTTYDVKVLAQYNTGVSAPLIGEGTTLYLNIT NIETYDVGHDSFCIKWSPHRAATSYRIKLNPVDPSSLGQQEVTIPAGLPQYCFDELSPDS LYTATVFVQTPNLEGPGVGAKERTLVKPTPVPTLPPTPTPPPTIPPGWAVCKGAKADVVF VIDGSWSIGEESFTKVVHFVSSIIAAFDVVGPSGMQVSFVQYSDGSKTEFKLNSYADKGV AMAAVHHIRYRGGNTKTGEALKHTYEKAFSVENGMRRNVPKVVVAITDGRSQDEVKKNAA KLQHAGYSVFAIGVADVDFVELQEIGSKPSDRHVFVVDDFDAFDSIKENLITFICETSTS SCPLIYLNGFTSPGFRMLEAFNLTEKTYSSVPGVSMEPGSFNSYTAYRLHRNAFLTQPST ELHPDGLPDTFTIILMFRLLPDSPAETFDLWQVSSKDHKPETGVTVDGSAQTVSFYNKDE TGEIQRVTFDHSLVKKIFHGSFHKLHILVSSSSVKLKVDCQEVEEKKTKAAGNVSRDGYQ VLGKMAKSIGSKGQSATVSQRPPNHHQEPRQVKSFHPQFVLQRDELKCPALPNACTCTSE ASGQPGPQGPVGAPGSKGPRGERGEAGAPGPAGPPGNIGPPGPMGLPGPQGPSGMSIPGE AGRPGPKGDPGDSGLPGQKVSPVLLWFWTGIGCSLLPQGDFAPQNMMRSIARQVCSQLVS DQMSRVNTMLNQIPNGNYRSSSSPGPPGPPGPPGRQGPRGEPGAGGRNGFPGSPGQPGQQ GERGPAGEKGDRGVPGVGQKGPRGPPGPAGESRTGTPGPSGSPGPRGPPGRPGYAGARGP PGPPGYCDSSQCVGIPYNGQGYIGTRAGTAPQENQLLQNQRRKRSLPRTPSDRLTS NT seq 6291 nt NT seq  +upstreamnt  +downstreamnt atgagggtgagctgggaggcggcggccggagcgagcgggtacctgctgctgtaccgctcc atcaacgcctcggagcctcaggaggagcaggaggttcgtgttgctggaggcgtgacgaac acccagctgctgcagctcatccccaacacgcagtacgctgtcacactcattgctctgcac ggcgaggccaccagcgaggccctggagggccgcggggtcaccttacctctgtcccctgct ggagagctgaggatcagcgacgtcacccacagcagcatgatgctgaactgggacgcggct cctggagccgtccgcagatacatgatcacctacaaacctgacgggggagagctgaaggag gtggaggtgaacggtgacgtcaccacgctgcagctgaccagcctgatctcccagacggag tacgatgtcgccgtcacccccgtgtacgacgagggacctgccgcccccatgctcggaacc gccatcacagatactgtcccagctcccaagaacctgcagttctccgaggtgacccagaac tccttcagagccacctgggaacatggcgctccagatgtggcgctcttccggatctcatgg accaggaaaggcgagaaggaccccaagaacgaaatcctgaacaacgatgagaactcgtac gttctggagaacctggacccggacacggagtacctggtgaccgtcacggccatctatccc gacgagtcggagagcgaggatctgatcggagccgagcggaccttgctgaaggctccagat gtgcgacccgagccgccgcggaacctgcgggtgttcaacgccaccgtctcctcgctgacc gtgaagtgggacgccgctcccggtcccgtcaagaactacaaggtcacttacctgccggtc gccggcggcgagcctcagacgctgcaggtcggcgggaagaagaccaacgtcatcctgcag cagctgcagcccgacacgccgtactccgttaccgtggcagccgtctacccatcaggcgcc agtagggacatcaaaggagagggcaaaaccaagcccctaggcagcgtgaggaacctgcag gtgctcaaccccaccatgaccacgctgaacgtgcggtgggagccggcggagggccgggtc agcgagtacaaagtgatttacgctccggcagccggaggagcggagagcatggtaggactg gaaacagtgtcggcgggaaccacggccaccatcctgcgcggcctgcagcccgacacgctg tactccgtcacgctggttccggtttacgctgagggagacgggaagaggatgtctgaaaac gggaaaaccagagcgttaggcggcgtgaagaacctgatggtgagcgaccccaccatgacc tccctgaacgtccgctgggacccggccgacagcgccgtgcggctctacaaggtcttctac gttcccgccgccggcggccgagaggagatggaacaagttccctcaggaaccacggccacc gtcctgaggaacctgcagcccgacacgctctacaccgtgtccgtggtgccggtgtacccg gcgcgcgaaggccggcggcagtctgaggacgggaagacgttgcctctgagcggcgtcagc ggcatgagggtcagcaaccccaccatcaccacgctcaccgtcaactgggacgccgccgac ggcaacgtccagggctacaaggtcatctacgtcccggcgaacggcggcctggaaatcgtg gaacaagtgtctgagagcaccacctccaccatcctgcagaagctgctgcccgacaccagc tacaccgtcaccgtggtgccggtgtacgccgagggagacgggcccagcctgaccgacacc ggcaagaccaggccgctgggatccgtcaggaacctgcgggtcaccgaccccactaccagc accctgaacgtccgctgggagccgcccgagggaaacgtccgcgaatacgtcgtgacctgg gtgccgacggccgggggagaggaggaaatggaccaggtccctggaaccgtgtccagcacc gtcctgaagcagctgcagccggacacggagtactcggtcaccgtcgtccccgtctaccca gagatggaggggaagtccatgtctgagacggggaagacaaatcctctgggcggagtgaag aatctgaaggtggtggatccctctatcagcacgctgaccgtccgctgggacccggccgtg ggaaacgtccggacctacaaggtcttctacgccgcccagcccggaggacaacaggaagtg gaggaggtttccggcggcaccaccaccaccgtcctgaggaacctgcaggccgacacgctc tacagcgtggcagtggttcccgtctaccctgacgtggaggggatccggcaggaggaccag ggcaggacgaagcctctgggcggagtgaggaacctgcaggtgaccgacccgaccaccagc tccctgagggtccgctgggagccggccgagggcgacgtccgtcagtaccgggtcctgtac gcgccggcggccggcggccccgagagcgcgatgcaggtttccgggctcaccaccagcacg gttctgacggagctcagcccggacaccgagtacagagtgaccgtcgtccccgtctacgag gacgtggagggaaaccgcatgtctgagaacgggaaaaccaaggttctgggcggggtgaag aacctgcaggtcaccgacccgaccaccagctccctgagggtccgctgggaggcggctgag ggcaatgtccgccagtaccgcatcttctacatcccagcagccggcggcgccgaggacatg gagcaggtttcgggcggaaccaccgacacggtgctgaggaacctgctgtcggacacgccc tacaccgttaccgtggttcccgtttaccccgagggcgaaggcttgcgccaggccgacaga ggaaagacccttccgcggacgccgcccaggaacatccaggtgtacaacccgacgcccagc agcctgaacgtccgctgggaggcggcgtctggccgggtgcagcagtaccgcgtggcctac gccccgctgagcggtgcccgggccgccgagtcggttctggttcctggaagcatcaccaat gcctacctggacaacctgatcccggacacgccctacgccatcaccgtcacggcgctgtac gccgacgccgagggggcgtcggtcaagggcgacggcaaaacactgccccgagccggcccc aggaaaatgcgcgtgtacgacgccaccaccagcagcctgacgatcggctgggaccacgcc gagggcccggtccgccagtacaggatcgcctacgcccccatgaccggagaccccatcaca gagtttacgatggttccagggaaccggaacaacgccatgctgcccagtctgctcccagac acgccctacaacatcaccgtggaggccatctatgccgaggggcccggagggtccctgaac gggaacggacggacaatcggcatgctgagtcccagaaacctgcgggtctcagatgagtgg tacaccaggttccgggtatcctgggagcccgtctctgctccagttcagggataccggctc atctactcgcctcaaggtaaggaccagccggtggacttctttgtgggcgacgtcacctcg ttcactctgaccaacctggagcctggaaccacctacgatgtgaaggttctggctcagtac aacaccggggtcagcgcgccgctcataggagagggaaccacactttacctgaacatcacc aacattgagacctacgatgtcggccatgacagcttctgcatcaagtggagtccgcaccgc gcggcaacgtcctaccgcatcaaactcaaccctgtggacccctccagtttgggtcagcag gaggtcaccatcccggccggcctgcctcagtactgcttcgacgaactctctccggactct ctgtacacagccaccgtcttcgttcagactcccaatctggaaggtccaggagtcggcgcc aaggagcggacactggtgaagccgactccggttccgactctgcccccaaccccgacgccg ccccccaccatcccacctggatgggcagtgtgtaaaggagccaaagcagacgttgtgttc gtcatcgacggctcctggagcatcggggaggagagcttcaccaaggtcgtccacttcgtc tccagcatcatcgccgccttcgacgtcgtcggaccgtcagggatgcaggtttccttcgtt cagtacagcgacggctcaaagaccgagttcaagctcaactcatacgcagacaaaggcgtc gccatggcagcggtgcatcacatccgctaccgaggaggaaacaccaagacaggcgaggcg ctgaagcacacgtatgagaaggccttctcggtggagaacgggatgcggaggaacgtcccc aaggtggtggtggccatcacggacggtcggtctcaggacgaggtgaagaagaacgccgcc aagctgcagcatgcagggtacagcgtcttcgccatcggcgtggcggacgtggacttcgtg gagctgcaggagatcggcagcaagcccagcgacagacacgtgttcgtggtggacgacttc gacgccttcgactccatcaaggagaatctgatcaccttcatctgcgaaacgtcgacttcc tcctgtcctctcatctacctcaacggcttcacctcacctgggttcaggatgctggaggcc ttcaacctgacggagaagacctacagctccgtccccggcgtctccatggagcccggatcc ttcaacagctacacggcgtaccggctgcaccgcaacgccttcctgacccagcccagcaca gagctgcacccagacggcctgcccgacaccttcaccatcatcctgatgttccgcctgctg cccgactctcccgccgagacctttgacctctggcaggtctcctccaaggaccacaagcct gagaccggagtcaccgtggacggttctgcgcagactgtttcgttctacaataaggacgaa accggagaaatccagagagtcacgtttgaccacagcctggtgaagaagatcttccatggc agcttccacaagctccacatcctggtttcctccagcagcgtgaagctgaaggtcgactgc caggaagtggaggagaagaagacaaaagcggccggcaacgtttccagagacgggtaccag gttctgggcaagatggccaagtccatcgggtccaaaggccagtctgccacggtgagtcag cggcccccgaaccaccaccaggaacccagacaggttaaatcatttcatccccaatttgtc ctgcagagagacgagctgaagtgccccgccctgcccaacgcctgcacctgcacgtcggag gccagcggccagccgggcccccagggtccagtgggcgctcccgggagtaaggggccccga ggtgagcgaggcgaagccggagctccggggccagcagggccgccaggaaacatcggaccc ccagggcccatgggtctgcccggcccccaggggcccagcggcatgtccatccctggagag gccggccggccgggaccgaagggagaccccggagactcaggccttccgggacagaaggta agcccggttctgctctggttctggaccggaatcggctgctctctgttgccgcagggcgac ttcgccccccagaacatgatgcgctccatcgcccgccaggtctgctcacagctggtcagc gaccagatgagccgggtcaacaccatgctgaaccagatccccaacgggaactaccgcagc agcagcagcccgggccccccggggccgccagggccgccgggcaggcaggggccccgtggg gagcccggtgccggaggcaggaacgggttccccggcagcccgggccaacccggccagcag ggcgagagaggtcccgcaggagaaaaaggcgaccgaggagtcccaggagttggacagaaa ggacccagagggccgccaggtcctgcaggagagagtcggaccgggaccccgggcccctca ggttcccccgggccccgcggccctccgggacgtccgggctacgccggggcccgcggcccc ccggggccccccggctactgcgactcctcgcagtgcgtggggattccctacaacggccag ggatacataggaacccgggccggcaccgccccccaggagaaccagctgctccagaaccag cgccggaagaggtcgctgcccagaacgccgtctgacaggctgacgtcgtaa

DBGET integrated database retrieval system