Poecilia mexicana (shortfin molly): 106905316
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Entry
106905316 CDS
T08022
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106905316 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106905316 (nup54)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106905316 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
106905316
NCBI-ProteinID:
XP_014825563
Ensembl:
ENSPMEG00000003660
UniProt:
A0A3B3WIE0
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MAFSFGGAATNTGPGTSGFSFGQFGAKTTASTTFGFNPTATTTTASSGFGTLTAPAFGAA
TTTATPATGFSFGPSNTGFGGLGAGSTTAGGFSFGGFGLNANPAAVSFSAGCFGTATTTG
SVFNFANSLASTGTFGGFGTATTTAAAPGSTFNFAPSNTTGGLFGNTQNKGFGFPSALGT
GTTTGATGFGTGLGTAGLGFGSFNIQPTQQQQGGLFGQLAQQQGQAQPTQLYQQVTALSA
PTLLGDERDSILAKWNQLQAYWGTGKGYYVNNNLPVDFTQENPFCRFKAVGYSCVPVSKD
EDGLVVLVLNKKEPDVRAQQQQLVESLHKVLGSNQILTVNVEGVKALPNDQTEVIIYLVE
RSPNGTSKRIPASTLFTFLEQSGIKAQLTQIGVVMSVTRTELSPAQLKQLLQNAPAGVDP
IIWEQAKVDNPDPEKLIPVPMVGFKELLHRLQIQEQMTKQHQTRVDIISNDISELQKNQA
TTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNAPTQ
FKGRLNELMSQIRMQNHFGAVRSEERYNVDADLLREIKQHLKQQQEGLSHLISVIKDDLE
DIKLIEHGLSDGGHMRGGILS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggtgccgcgactaacacagggccagggacgtccgggttttca
tttggtcagtttggtgccaaaaccacagcttcaacaacgtttggttttaacccgacagcg
accactaccaccgcttcttcaggctttggcactctgacggctcctgcttttggcgcagcc
acgactacagctacaccagccacgggatttagctttggtccctccaacacaggatttggg
gggcttggagctggaagcaccacggctggtgggttcagctttgggggttttggtttaaat
gcaaatccagcagcagtcagcttcagtgcaggttgcttcggtacagcaaccacaactggc
tctgttttcaattttgctaatagcctggctagcacaggtacgtttggtggctttgggaca
gctacaacaactgctgccgcaccaggatccactttcaactttgccccctccaacacaaca
gggggcttgtttggtaacacgcagaacaaagggtttggattcccatctgcactcggaact
ggtaccactactggagcgacgggctttggaactggattaggaacagctggcctcggcttt
ggaagttttaacatccagccgacacaacagcaacaaggaggcttgtttggccagctggcc
cagcagcagggtcaagctcagccaacccagctttaccagcaagtgaccgctctgtcagcc
ccaactctgctgggagacgaacgggactccatacttgccaagtggaaccagttgcaggcc
tactggggaacagggaagggctactatgttaacaacaacctgccagtggactttactcag
gagaaccctttctgcaggttcaaggcagtggggtatagctgtgtcccagtaagcaaggac
gaagatggtttagtggtgttggttctgaataaaaaggaacctgacgtccgtgctcagcag
cagcagctggtcgagtcgctgcacaaggttctgggaagcaaccagattctgaccgtcaac
gtagagggtgttaaagctctgcccaacgatcagacagaagtgatcatttatttggtggag
cgttcccccaacggcacctccaagaggatcccagcttccacactcttcaccttcctggag
cagtccggcatcaaggctcagctcacccagattggagtggtcatgtcagtaacacgcaca
gagctgtccccagcacagctgaagcagctgctgcaaaacgctcctgcaggtgtggatccc
atcatttgggaacaagctaaggtggacaaccctgacccagagaagttaatccccgtaccc
atggtgggtttcaaggagctgctccacagattgcagatccaggagcagatgaccaagcaa
caccagaccagagtggatataatctccaacgacatcagtgagctgcagaagaaccaggcg
acaactgtagccaagatcgctcaatacaagaggaagctgatggatctgtctcacagagtg
ctgcaggtactgataaagcaggagattcagagaaaaagtggctacgccatccaagtggat
gaggagcatctgagggtgcagctggacaccattcagtcagaactcaatgcacccacacag
ttcaagggtcggttgaatgagctgatgtctcaaattcgaatgcagaaccactttggagcc
gtgagatccgaagagcgctacaacgtcgacgcagacctcctccgagaaatcaaacaacac
ttaaagcagcaacaagaaggtttaagtcacctgatcagcgtcatcaaagacgacttggag
gacatcaaactcatagaacatggactaagcgacggcggccacatgagagggggcatcctg
agctga
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integrated database retrieval system