KEGG   Poecilia mexicana (shortfin molly): 106905364
Entry
106905364         CDS       T08022                                 
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmei04121]
    106905364
   03400 DNA repair and recombination proteins [BR:pmei03400]
    106905364
Enzymes [BR:pmei01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106905364
Ubiquitin system [BR:pmei04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106905364
DNA repair and recombination proteins [BR:pmei03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    106905364
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-RING_2 ResIII DEAD RING_XB3-XBAT31 zf-C3HC4_4 Prok-RING_4 zf-Nse zf-rbx1 zf-ANAPC11 zf-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 106905364
NCBI-ProteinID: XP_014825651
Ensembl: ENSPMEG00000002978
UniProt: A0A3B3X2B8
LinkDB
Position
Unknown
AA seq 961 aa
MFSRWWKFGRDRFTDVDLFSDGSESAAETLSQAIRAAASQEPDADGSVLFGQLRGTVVGL
RYYTGVVNRGEMVGLVREPHNPYDKNAVMVTNVLGRQVGHIRKELAAAMAHVMDNSLAKV
EGVVYSGTNNSFSMPVTLSFLGSEENRDAVVKHMASRGFRLDADGGGAAGAKGRSFGSPG
SSFSFKKGVTIPLTAEELKNAFDNLFEDLMESKDGEKEAAESVATPLLPHQKQALSWMCA
RENKDALPPFWEKRGDLYYNSLTCFSAKEIPERVRGGILADDMGLGKTLTTIALILTNFH
KGKPLPVERCVGPFSPTKAKNKSLEGFKLQGSSSAVNSAGESSHCSATPKEDVIDAADGV
LEEDEPQKSTGKEKHKPTKRKPSKEGPALLEDLGFAAALSCTMSETKPKKKKAAEKCKLK
QSVEVSTSESTDDLSAKATLIVCPLSVLSNWLDQFEQHLRSDVKPNVYLYYGSERNRSKT
FLSSQDVVITTYNVLSSDFGNTSPLHGINWLRVVLDEGHVIRNPNAQMSKAALELKAQRR
WILSGTPIQNSVKDLWMLLAFLRLKPFHVREWWNRVIQRPVIQGDRAGLQNLQTLVKCIT
LRRTKNSEVNGRRLVSLPKKTVYVEQVELSAQEREEYELARNEGRRTIGRYVAEGSVLKN
YADVLAILMRLRQYCCHPDLIGKIAADLASADTPGELRQRLVEKMRLVLASGSDEECSVC
LDSIRMPIITHCAHVYCRPCIAQVISSEQKARCPLCRSEIKTSELVEFPPEEMEDEKSVE
SDRWRTSSKVQALMGNLLRMRSEDVGLKCLVVSQFTRFLTVLQTPLREHGFSFVRLDGTM
SQKKRTQIIQEFQSSAADSPRVMLLSLKAGGVGLNLTAASRVFLMDPAWNPATEEQCIDR
CHRLGQERNVVVTKFIVKDSVEENMVKIQKKKQDLVEKAFGSASTDRKTSRIDDIRALLE
V
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgttttcccgctggtggaagtttggaagagacagattcaccgatgtggacctcttctca
gacggctctgagtccgctgcagagacgctgtcccaggccatcagagctgctgcctcccag
gagccggatgcagatggcagcgtgttgtttggccagctgaggggcaccgtggtcgggctc
agatattacactggtgtggtgaaccgaggggagatggtgggcttagtacgggagcctcac
aatccgtacgacaagaacgcggtgatggtcactaacgtgttgggcagacaggtgggacac
atcaggaaggagctggctgcagccatggcgcatgttatggacaacagcttggctaaagta
gagggggtggtttactcagggaccaacaacagcttctccatgccggtcacgctgtcgttc
ttggggagcgaggagaacagggacgccgtggtgaagcacatggcgagtcgagggttcaga
ctggacgcggacggaggcggagccgcaggcgcaaaggggagatcttttggcagcccgggt
tcctcgttttccttcaagaaaggcgtcaccatcccactgactgcagaggagttaaagaat
gccttcgataacttatttgaggatttgatggagagcaaagatggggagaaagaagcagct
gagtctgtggccacgccgctgctgcctcaccagaagcaggcgctgtcctggatgtgcgct
cgggaaaataaagacgcgctgccgccgttctgggagaagcgaggcgacctgtactacaac
agcctcacgtgtttctccgccaaagagataccagagagagttcgggggggaatactggct
gatgacatggggctgggtaaaactctgacaaccatcgcactgatccttaccaacttccac
aaagggaagcccttgcctgtggagagatgtgtggggccattttcacctaccaaagctaag
aataagtctctggaaggctttaaactgcaagggagcagcagtgcagttaattcagcagga
gaaagttcccactgctccgccactccaaaggaggacgtgatcgacgcagcagacggggtg
ctggaggaagatgagcctcagaaaagcaccggcaaagagaagcacaaacccactaagcgc
aaacccagcaaagaggggccggcgttacttgaagacctgggctttgctgctgccttgagt
tgcacgatgtcggaaaccaagccaaagaagaagaaagcagcggagaaatgcaaacttaaa
cagagtgtagaggtgtctacctctgagagcacagatgacttatcagcgaaggccactctc
atcgtctgtcctctctctgtgctcagcaactggctggaccagttcgagcagcacctccgg
tccgatgtgaagcccaacgtctacctgtactacggttctgagcgcaacaggagcaagacc
tttctgtcctctcaggacgtggtgatcaccacctacaacgtcctctcgtccgactttggg
aatacgagtcctttacatgggatcaactggctgagggtggttctggacgaagggcacgtc
atcagaaacccaaacgcacagatgagcaaggccgcgctcgaactgaaagctcagagacgc
tggattctttcaggcactcccatccagaacagcgtgaaggacttgtggatgctgcttgcc
ttcctgcggctgaagcccttccatgtgagggagtggtggaaccgggtcatccagaggccg
gtcatacaaggagaccgagccggcctgcagaacctccagaccctggtgaagtgcatcacc
ctgaggcggaccaagaacagcgaggtaaacgggcgccgcctggtgtcgctgcccaagaag
acggtttacgtggagcaggtggagctcagcgcgcaggagagggaggagtacgagttggcc
cgcaacgaggggagacgcaccatcggcagatatgtagccgaagggtccgtgttgaagaat
tacgccgacgttctcgccatcttgatgcggctgagacaatactgctgccaccctgatctg
atcgggaaaatcgctgcagatttagcctccgcagacactccaggggagctgcggcagcgg
ctggtggagaaaatgcgtctggtgttggccagcggctcggacgaggaatgctccgtgtgt
ctggactccatccgaatgcccatcatcactcactgcgcccacgtttactgccggccgtgc
atcgcacaagtcatcagcagcgagcagaaggcccggtgtcctctctgtcgaagcgaaatc
aagaccagcgagctggtggagtttcctccagaggagatggaagatgagaaaagcgtggag
tctgacaggtggaggacgagctcgaaggttcaggcgctgatgggaaacctgctccggatg
cggtccgaggacgtcggcctcaagtgtctggtcgtctctcagttcacgcgcttcctcacc
gtccttcagaccccgctcagagagcacggtttcagcttcgtccgtctggacggcacgatg
agccagaagaagagaactcagatcatccaggagtttcagagctctgcggcggacagcccc
agagtcatgcttctgtcgctgaaggccggaggggtggggctgaacctgaccgcggcgtct
cgcgttttcctcatggatcccgcctggaacccggctaccgaggagcagtgcattgatcgc
tgccaccgtttaggccaggagagaaacgtcgtcgtcaccaagttcattgtgaaggactcg
gtggaggagaacatggtgaagatccagaagaagaagcaggacttggtggagaaggcgttc
ggctcagccagtaccgacaggaaaacgtctcggatcgatgacatcagagctctgttggag
gtgtag

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