Poecilia mexicana (shortfin molly): 106905619
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Entry
106905619 CDS
T08022
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106905619 (pdzrn4)
Enzymes [BR:
pmei01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106905619 (pdzrn4)
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106905619 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
106905619
NCBI-ProteinID:
XP_014826026
Ensembl:
ENSPMEG00000005594
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVEHDESVVEAIRRDPIVVQVLRRTPARAT
VAQRSCGAAQDVCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCQSIHTME
HDFYECPEYMSNTPGEGERTEEYEYEEVELCRANREDKLGLTLCYRTDDEEDTGIYVSQV
EPNSIAARDGRIKEGDRILQINGFEVQDREKAVALLSSEEAKSIRLLVTRPEIQLEEEAV
WLDDEQQRLVEELKMEILEEKRKQREQSFEMADKLQGDDDVTTDTATCSSNNQDSGFGRS
TDSTEHQPLLARLYRRSPAQCLRDRWQSEHPHNRRGTVVPQHAQSTKTHSTSQGNESVVS
IRNSGCGVRGLENCFQQLLELKCQIRNGGECGVYSIRHSIECSLTGQGGGDGDSEGDVGA
GGGVEQELKMLNEELRSIELECQSIMQAHQLRKSQQLEQSQSAPCSPGTNQKTGQKRHGR
LADIHEYPERSDSDRVREKDSSSAYNTAESARSTPLGMERSPDHSLQRQISITNQKNLRL
ASSAPSNPIPIPKPQGTHRPCRPADQGPVISSSPDQSNPSRSESDPALPADDERCDKKGR
SRDSRRALPYGASYQTGTYHGQGGSKQLQSYMQLLQQHSSLEYSQSQLSLLSVCRDPMHR
NGRTGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKM
GRYWSKEERKQHLARAREQRKRREFMQKSRLDCLKEGPASGTEGKKEINILELSHKKMMK
KRNKKILDNWMTIQELMSHGARVPEGSTVHNAFLSVTTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgagaggaacactacaaactgctctacgag
attgcacaggtgaacgggcgtgacttctccaaggttgaacatgacgagtcagtggtggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacccccgccagagccacc
gtcgcgcaaaggagctgcggcgcagcgcaggacgtgtgtgtggtcgacgtctgcacacaa
acagacatcacattcgagcacatcatggcgctggccaagctccggcccgccaccccgcca
gtcccagacatctgtccattcttgctctccgacagctgtcaatccatacacaccatggag
catgacttttacgaatgtccggagtacatgtccaacactccaggagaaggggaaaggact
gaagagtacgagtacgaggaagtggagctgtgtcgggcgaacagagaggataagctgggt
ctgacgctatgctaccggaccgatgatgaggaggacaccggtatttacgtcagtcaggtg
gagccgaacagcatagcggcgagagacggacgcattaaggaaggagaccgcattctgcag
ataaatggctttgaagtgcaagaccgggagaaagccgtcgccttgttgtcaagcgaagaa
gcaaagagcatcagactcctggtgacaaggccagagatccagctggaagaggaggctgtg
tggctggatgacgagcagcagcggcttgtcgaggagctgaagatggagattctggaggag
aagaggaagcagagggaacagagctttgagatggcagataagcttcaaggcgatgatgac
gtcacaacagacacggccacctgttcttccaacaatcaagacagtggatttgggcgcagc
acagacagtaccgagcaccagcctttgttggcaagactttacaggaggagcccagcgcag
tgcctgagggatcgatggcagtcagaacatccacacaacaggcgagggaccgttgtacca
caacacgcccaaagcacaaaaacccactcaacgagccaaggcaacgaaagcgtagtgagt
attcgtaacagtggttgcggagtccgaggcttagagaactgcttccagcaacttttagaa
ctcaagtgccaaatacgaaacgggggcgaatgtggggtgtactccattagacacagcata
gaatgtagtctcactgggcaaggtggaggggatggagatagtgaaggtgatgttggtgca
gggggtggagtagagcaggagttgaagatgctgaatgaagagctgcgcagcattgagttg
gagtgccagagcatcatgcaagcccatcaactacgcaagtcccagcagctcgagcaatca
cagtctgcaccctgctcaccaggaacgaaccagaaaactggacaaaagaggcacgggagg
ctggcggacattcatgagtaccccgagaggtccgacagcgacagagttcgcgagaaggac
agctccagtgcctacaacacagcggagagtgcccggtcaacgcctcttggcatggagaga
tcccctgatcattcgctgcagagacagatcagcattactaaccagaaaaacctcaggctt
gcctcttctgcaccatccaatcccattcctatccccaagcctcaaggaacacataggccg
tgcaggccagccgatcaaggtccagtcatctccagcagccctgaccagagcaatccgtcg
cggtctgagtcggacccagctctaccggcggacgatgaaagatgcgacaaaaagggaagg
agcagagactcgagaagagctcttccttatggcgcttcatatcagacgggcacctaccac
ggccagggaggatccaagcaacttcagagctatatgcagctgctccagcagcactcgtcc
ctggagtactcacagagccagctgagtctcctcagcgtgtgtcgagatcccatgcatcgc
aacggtcgtacgggggagcctcgcctggagtggaaagtcaaagtccgcgcagatgggaca
cgctacgtcgccaggagacccgctcgcgaccgcatacttagggagcgggcgctcagaatc
agagaagagaggagcggaggcatgaccacagatgacgacgcgatgagtgagatgaagatg
ggccgctactggagcaaagaggagaggaagcagcatttggcaagagccagagagcaaagg
aagaggagggagttcatgcagaaaagccgtctcgattgcctaaaggagggaccggcgagc
gggaccgagggcaaaaaggagatcaacatcttggagctcagtcacaaaaagatgatgaag
aagcggaacaaaaagattctggacaactggatgaccatccaagagctgatgagccatggg
gcgagggtcccagaggggtctactgttcataatgcctttctttctgtcaccactgtttaa
DBGET
integrated database retrieval system
