Poecilia mexicana (shortfin molly): 106905780
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Entry
106905780 CDS
T08022
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04010
MAPK signaling pathway
pmei04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106905780
04020 Calcium signaling pathway
106905780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106905780
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
106905780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
ETRAMP
Motif
Other DBs
NCBI-GeneID:
106905780
NCBI-ProteinID:
XP_014826249
Ensembl:
ENSPMEG00000013953
LinkDB
All DBs
Position
Unknown
AA seq
1359 aa
AA seq
DB search
MADEDDERPFICSLPVDNGIMSCSDVPARREGGRACCLDKEDVVYRQSIGLSPEPLTNGS
VSVAGLCVNWNQYYTRCHTGSSNPHKGAINFDNIAYAWIVIFQVITLEGWVEIMYYVMDA
HSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCSSSSTLASEP
GDCYEELFQLVCHCLRKARRQTVAFFNSLRGKPRGFRGVGRGRRGGDEREKKANGRRELE
TRLVSRPGHPCPHHHKPVHASSAEPVALTAASKVDGCPQCAAALELKDGVGAVCVAGDET
EEEAVDKTNSEDKQKQGTKDEDKKPLKSAENHIGCSPKKGCKELWQDTRKKLWGIVESKY
FNRGIMIAILINTISMGIEHHEQPEQLTNVLEICNIVFTSMFSMEMVLKLTAFGSFNYLR
NPYNVFDGIIVIISVCEIVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDN
VATFCMLLMLFIFIFSILGMHIFGCKFSLKTETGDTVPDRKNFDSLLWAIVTVFQILTQE
DWNAVLYNGMAATSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDHS
SSNYDESEKRDSIKLSDPRICTLTPNGHLELGALSGSRGSYSSEKRSFTNESRKSSLMSV
GRSSLERRSLSLRHGRSSNYHNWGRPFPPQSGWSRRSSSNSLGRRTYGFSGAPPVGGSLR
VRSTRSPYSYHHASEQESLLSHSLHSHHSHHPLPPPMFLSRHFGGRRDRRALSLELPELL
RTGGQAPAPPPVQIPDHVRKSGSGAAGSLTGGSGAGSGLGADHRDCNGKASGHHNHLMTN
VFPQVNARKDRADLDEETDYSWCFRIQKMMEVYKPDWCETREDWSVYMFSPQNKFRVLCQ
SIIAHKLFDYVVLVFIFLNCITVALERPKILQGSLERLLLTLSNYIFTAIFVAEMTVKVV
SMGLYLGETAYLRSSWNILDGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVI
SRAPGLKLVVETLITSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGPDVKNVTNK
TDCIRAGYRWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPLTNNNPW
MLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEVEEARRREEKRQRRMEKKRRKAQK
LPYYSSYGRTRLAIHALCTSHYLDLVITFIICINVITMSLEHYSQPQSLETALKYCNYFF
TSTFVIEASLKLVAFGFRRFFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRI
MRVLRIARVLKLLKMATGMRALLDTVVQALPQVRHLGAN
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgaagatgacgagcggcccttcatctgctccttacccgtcgacaacggcatc
atgtcctgctcagatgtcccagcccgccgtgaaggaggccgggcctgctgtttggacaaa
gaggacgttgtctaccgtcagtccattggactgagtcctgaacctttgaccaacggcagc
gtcagtgtagctggcctgtgcgtcaactggaaccagtactacaccagatgtcacactgga
agcagcaacccacacaaaggtgccatcaattttgataacattgcctatgcctggatcgtc
atctttcaggtgatcactctggagggctgggtggagatcatgtactatgtgatggatgct
cactctttctacaactttatctacttcatcctcttaataatagtcggttccttcttcatg
atcaacctgtgccttgtggtcatcgcaacccagttttcagagaccaagcagcgggagcac
cagctaatgcaggagcagcgtgctcgctgctcgtcctcttcgacgttggccagcgagccg
ggagattgctacgaagaactcttccagctggtctgccactgcctccgcaaggccaggagg
caaacagttgccttttttaacagtttgcgaggtaaaccccgtgggtttcggggcgttggg
cgaggaagacgaggaggggatgagagggagaagaaggccaatggaaggcgagaacttgag
acgaggcttgtgtccaggcctggtcatccgtgccctcatcatcataaaccagttcacgcc
tcgtcagctgagcctgtagccctgaccgctgcctcgaaggtagacggttgtcctcagtgt
gctgcagcactggaacttaaagacggagtgggagccgtctgtgtcgctggcgatgaaaca
gaggaggaagcagtggacaaaaccaacagtgaggataagcaaaaacaaggaaccaaagac
gaggacaaaaaacccctgaaaagtgccgagaaccatataggatgtagcccaaagaaagga
tgcaaagaactttggcaggacacgaggaagaagctgtggggcatcgtagagagcaagtac
tttaaccgaggcatcatgatcgccatccttatcaacaccatcagcatggggattgagcac
cacgagcagccggagcagctcaccaacgtgctggagatctgcaacatcgttttcaccagc
atgttctccatggagatggtcctgaagctcaccgctttcggctccttcaactacttgagg
aacccctacaacgtgtttgatggcatcatcgtcatcataagcgtttgtgagatcgtcggc
cagtcggacggcggcctgtccgtgctccggacgttccggctgctgcgcgtgctgaagctg
gtcaggttcatgccggctctcaggagacagctggttgtcctcatgaagaccatggacaac
gtggccaccttctgcatgctgctcatgctctttatcttcatcttcagtatcctcgggatg
cacatctttggctgtaaattcagtctgaagacagaaacgggggatacagtcccagacagg
aagaactttgactccctgctctgggctatcgtcaccgttttccagattctgacccaggag
gattggaacgccgtgttatacaacggcatggcagccacctcgccgcttgctgctctttac
ttcgtggcgctcatgacctttggaaactacgtcctcttcaacctgctggtggccattttg
gttgaagggtttcaggcggagggcgatgcgaatcgctcctactccgacgacgaccactcg
tcctccaactatgatgagagtgagaaacgagactccattaagctgtctgatccaaggatt
tgtactctgacaccaaacggtcacctggagctcggggccctgtcgggctccagggggtcc
tactcctcggagaagcgcagcttcaccaacgagtcgaggaagagcagcttgatgagcgtc
gggcggagcagcctggagagacgctccctttctctgcgccatggccgcagttccaactac
cacaactgggggcgaccttttcctccacagtctggatggagtcgcaggtccagctccaac
agccttggtaggaggacctacgggttcagtggggcgccccctgttggcggcagcctgcgt
gtgcgcagcacccgctccccctactcctaccaccatgcttcggagcaggaatcccttctc
tcgcactctctccactcgcatcactcccatcatcccctgccgcccccgatgttcctctcc
agacatttcggaggcagacgggatcggcgggctctttccctggaactcccggaattgctc
cggacgggcggacaagctccggcaccgccgcccgttcagatccctgaccacgtgagaaag
agcgggtccggggcggcgggctcgctcacggggggctcgggagctggcagcggtctggga
gcggaccaccgtgactgcaacggcaaggcgtcgggtcaccacaaccatctgatgaccaat
gtcttccctcaggtcaacgcacgcaaggacagagcagatctagacgaagaaacagactat
agttggtgcttccgtatccagaaaatgatggaggtttacaagccagactggtgtgagact
agagaggactggtctgtctacatgttctctcctcaaaacaaattcagggttctctgtcag
tccatcattgctcataagctctttgattacgtggtcctggtctttatcttcctcaactgc
atcacagtggctctggaaaggcccaagatacttcaaggaagcctggaaagactgttactc
accctttcaaactacatctttacggccatctttgtcgcagagatgacagtcaaggttgtg
tccatgggcctgtacctgggagagacggcgtatctgaggagcagctggaacatcctggac
ggtttcctggtctttgtgtctctgattgatattgtcgtgtcaatggcaggaggcgctaag
atcctgggagtcctgcgcgttctccggttgctcaggacgttacggcctctcagggttatc
agcagggctcccgggctgaagctggtggtggagacgctaattacttccctcaaacccatc
ggaaacattgttctcatctgctgtgcctttttcatcatctttggtatccttggagttcag
ctcttcaaaggcaagttctactactgcgtgggtccggacgtgaagaacgtcacgaataaa
acggactgcatcagagccggttaccgatgggttcaccacaagtacaactttgacaacctt
ggacaggctcttatgtcgctgtttgttctagcatcaaaagacggctgggttaacatcatg
taccacggactggacgcagtggggattgaccagcagccgttgaccaacaacaatccgtgg
atgctgctgtacttcatctcgttcctcctgattgtcagcttcttcgtcctcaacatgttc
gtgggcgtggtggtggagaacttccacaagtgtcggcagcaccaggaagtggaggaggcg
aggcgcagggaggaaaagcgccagcgtcgcatggaaaagaagaggagaaaagcccagaaa
ctgccttactattcttcctacggccgtactcgtctggccatccatgctctgtgcaccagc
cactacctggacctcgtgatcaccttcatcatctgcattaacgtcatcaccatgtccctg
gagcactatagccaaccacagtcgcttgagaccgccctgaagtattgcaactacttcttc
acctccaccttcgtcatcgaggcgtctctcaagctagtggcattcggcttccgccgcttc
ttcaaggacaggtggaatcagctggacttggctatcgttctgctgtcggtgatgggcatc
actctggaggagatcgagatcaacgcctcccttcccatcaaccccaccatcatcaggatc
atgagagtgctccggatagcgcgagtgctgaaattactgaaaatggcaaccggcatgagg
gccctgttggacacagtggtccaggctcttcctcaggtaagacacctaggagctaattaa
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