Poecilia mexicana (shortfin molly): 106906129
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Entry
106906129 CDS
T08022
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106906129 (zc3h12b)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
106906129 (zc3h12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
PRORP
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
106906129
NCBI-ProteinID:
XP_014826744
Ensembl:
ENSPMEG00000002552
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MTAWSMVEKLKMEKRPCREQNIDSREAHHATDESEDGSSSESESEEHQWRRQPHRAQLGN
SSCRKREPLAVTKPHRQLCRSPCLDRPSFSQSSTLQDFRDDDSGGGSAGAASGLKPASGR
EYQTKMEFALKLGYSGDQVETVLNKLGATALINDVLAELVRLGNKVEHETQPCSAAAPSS
SRPPCVKETVSPEVSVEEESVDTYDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFR
EKGHKDITVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRF
ILKLAYDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSL
ENFLRKRPVVPEHKKQPCPYGKKCTYGHKCKYYHPERVNQPQRSVADELRAFAKLSAVKT
MSEGALAKCGTGPAAVKGDVGSEAKRVAPKRQSDPSIRSVACEPVEALSVARKSETNSVP
SLVSALSVPTMQPAKSHAAGALNTRSASSPIPGSLQFAHSSLEHMSSIQYPPILVTNSHG
ASVTYSEQFPKYDSVSDHGYYSLHSDFSNMSMSSMHNVDSFCSMEHEHVYQRTPSHCPES
CLSHSNSDSFSSYGELYPSSVDSSLEESIKVQQQAPAQARMQAFSHGFRHDALTRVQSYG
QEEPKQGPHKQSGAHLAPHIQHATVGARSSCPGDYPLAQNVLPPLSSQPTRSLGMTRMDS
ISDSRLYDSNPMRQRRPPLCREQHASWDPLPCGNESYGYHSYPLSNSLMPCCERVMVRSM
PDKMEQIWNSPWENPSAAEHQERYVIPDHQYQTYRNLCNIFPAYIVHSVMEKNPHLTDPQ
QLAAVIVTKLRSCH
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatggtccatggtggagaagctcaaaatggaaaaacgcccatgcagggagcag
aacattgactcaagagaggcccatcatgccacggacgagtccgaggacggtagcagctcc
gagagcgagtcggaggagcaccagtggcggcggcagccccacagggctcagctgggcaac
agcagctgcaggaagagggagcccctcgccgtcaccaaaccccaccgccagctctgccgc
tctccgtgcctcgaccggcccagcttttcccagagtagcaccctgcaagactttcgcgac
gacgactccggcggcggcagtgccggcgccgcgtcaggcctcaagcccgccagcggaagg
gagtaccaaaccaagatggagtttgctttgaagctgggctattccggagaccaggtggag
acggtgctcaacaagttgggggccacggcgctcatcaacgacgttctcgccgagttggtc
cgcctcgggaataaagtggagcacgaaactcaaccctgcagcgccgccgccccgtcatcg
tcacggcccccctgtgtgaaagaaaccgtcagtccggaagtttcagtagaagaagaatcc
gtggatacgtacgataaccttagacccatcgtcatcgatgggtctaacgtggcgatgagc
cacgggaacaaggaggttttctcttgtcgcggtatccagctggcggtcgagtggtttcga
gagaaaggacacaaagacatcactgtgtttgtccccgcctggaggaaggagcagtcgaga
cccgacgctctcatcacagatcaagaaatcttgcgcaaactggagaaagaaaagatcctg
gtttttaccccgtctcgaagagtccagggcaggagagtggtgtgctacgatgatcgcttc
atactgaagctggcttacgattctgatggaattattgtgtcaaatgacaactacagggac
ttgcaaaacgagaagccagagtggaaaaaatttatagaagagcgcctcctgatgtattca
tttgtcaatgacaaatttatgccacctgatgatccgctgggaagacatgggccgagctta
gaaaacttcctccgcaagaggcctgtggttccagagcacaaaaagcagccttgcccttat
gggaaaaagtgcacgtatggtcataagtgcaaatactaccatccggagcgtgtgaaccaa
ccacagcgatccgtggccgacgagctgcgagccttcgccaaactgtccgcggtaaaaaca
atgagcgaaggggctttggctaaatgtggtacaggtccagccgccgttaagggggacgtc
ggctccgaagcgaaacgcgtggcgcctaaacgccagtccgaccccagcatccgctcggtg
gcctgcgaacccgtagaggcgctctccgtcgcccggaagtccgagacgaattcagtgcct
tccctcgtgtctgctctcagcgtgcccaccatgcagcccgccaagagccacgcagccggg
gcgttaaacacccgctcagccagcagccccattccaggctctctgcagtttgcacacagc
tctctagagcacatgtccagcatacagtacccccccattttagtcaccaacagccacggc
gcctccgtgacgtacagcgaacagttccccaagtatgactcggtcagcgaccatggatac
tactcgcttcacagcgatttttccaacatgagcatgagcagcatgcacaacgtggacagt
ttctgtagcatggagcacgagcatgtgtaccagagaaccccgagccactgccccgagtcc
tgcctcagccactccaacagcgactcgttctcctcctacggggagctgtacccgagctcc
gtggacagcagcctggaggagagcatcaaggtgcagcagcaggctccggcgcaggcgagg
atgcaggccttctcccacgggtttcgccacgacgcgctcaccagagtccagagttatgga
caggaggagcctaagcaaggtcctcacaagcagtccggggcgcacctcgcacctcacatc
cagcatgccacggtgggagcccgctcctcctgtcctggagactacccgctcgcccagaac
gtcctgccgccattgtcctcgcagccgacgcggtctctaggaatgacgcgcatggacagc
atatcggactctcggctgtacgacagcaacccgatgaggcagaggcggccgccgctgtgc
cgcgagcagcatgcgagctgggacccgctgccctgcggcaacgagtcctatggatatcac
tcgtatccgctcagtaacagcctgatgccgtgttgcgagcgggtgatggtccgcagcatg
ccagacaaaatggagcaaatctggaactcgccgtgggagaacccgtccgcggccgagcac
caagagcggtacgtcattccagatcaccagtaccaaacatacaggaacctctgcaacatc
ttccccgcgtacatcgtccactcggtcatggagaagaaccctcatttaacagatccacag
cagctcgcggctgtgatcgttacaaaactgaggtcatgccactga
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