Poecilia mexicana (shortfin molly): 106906731
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Entry
106906731 CDS
T08022
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106906731
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmei04040
]
106906731
Ion channels [BR:
pmei04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106906731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Tmpp129
AFOR_C
Motif
Other DBs
NCBI-GeneID:
106906731
NCBI-ProteinID:
XP_014827614
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MTSSVPPLCFCDAPPGAAAPSPAASSGAAAGLSTMEKGGKGNGADQEEPESGPDQEKGGL
LSLLQSENSETAPAPMDSNVLLSRPPRRPAGGSTPFTREKLFTAASQGDAAQLHGLLDFL
QLHRKRLTSPEFKDESNGKTVLLKAFLNLKDGRNDTIEVLMDIAEKTLDSESFINAAYTD
PSYKGQTALHVAIERRALHYVELLVQKGADVQAKASGTFFQRNAKLGFYFGELPLSLAAC
TNQPEVVSFLLENPHRRADPTDRDSQGNTVLHMLVEIADDSAENTETVAEMYDKILVLHH
KLNSKVQLESMQNNEGLTPLKLAVKLGKIGLFRHMLNREFVAEETRQLSRKLTEWVYGPV
HSSLYDMSDMDTDENNSVLEIIVFGSEIPNRPEMLQIEPLRSLLQDKWQRFASKLFLLNF
LSYLLILAVFTTAAFYRKDGQPPFPVENVPADHLRCLGEIISVLGAARFLYKTITIFRRN
PPNISSLFTDGFTEILFFLQAALLLLCAVLYCCGRTEYVGLLVLSLALAWMNVLYYTRGS
RQLGIYNVMMQRMILGDLLHFLCVYIVLLFGFSAAVCTLIDDSPGGSPTNDSVPRQRSFN
VETFKCEKPSYNDIGFTTLELFKFTIGMGDLEFTDHVQNQTVFYVLLICYIVLTYILMLN
MLIALMGNTVERIKEQSQTIWNLQRAFTILDMERTLPRWLRTKLQSDASEMVCVRNDQDD
ARRFVRVTEINWKKWRSDVGVKLKEEPAGQLTTARTEEETSGNPWNVNVLLQRIRSRRQE
DSYVL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatctgttcctccgctttgtttctgcgacgctccacctggagctgcagctcct
tcacctgctgcctcatcaggagctgctgctggtttgtccacaatggaaaagggaggaaag
ggaaacggagcggaccaggaggagccagaaagcggtccagaccaggagaaaggaggcctt
ctgtctctgcttcaaagtgaaaactcagagacggcgcctgcccccatggacagcaacgtc
ttactgtcaagaccgccgcgtcgccccgccggcggcagcacgccgttcaccagggagaag
ctcttcacggcggcgtctcagggcgacgccgcccagcttcacggcctgctggacttcctg
cagcttcaccggaaacggctgacaagcccagagttcaaagatgaatcgaatgggaaaacg
gtgctgctgaaagcttttctgaacctgaaagacggcaggaacgacacgatcgaagtcctg
atggacatagcagagaaaaccctggactctgaaagcttcatcaacgccgcgtacacagat
ccttcttacaaaggtcagacggccttgcatgtggccattgaaagacgagcgctgcactac
gtggagctgctggtccagaaaggagctgatgtccaagccaaagccagcgggacatttttc
cagaggaacgcaaagctgggcttttattttggcgagctgccgctgtctctggccgcctgc
accaaccagccagaggtggtttcgtttctcctggagaacccgcaccgcagagccgacccg
accgaccgcgactcgcagggaaacaccgtcctgcacatgctggtggagatcgcagacgac
tcggcggaaaacacggagacggttgcagaaatgtacgacaaaatcctggttctgcaccac
aagctgaacagcaaagtccagctggagtcgatgcagaacaacgaaggtctgactccgctg
aagttagcagtcaaactgggaaagatcgggcttttccgccacatgttgaatcgagaattt
gtggccgaggagacgcggcagctgtcccggaagctgacggagtgggtctacggaccggtc
cactcctctctctacgacatgagcgacatggacaccgacgaaaacaactcggtgctggag
atcatcgtcttcggcagcgaaatcccgaatcgcccagagatgctgcagatcgaaccgctc
cgcagccttctgcaggacaaatggcagagattcgcctccaagctgttcctcctgaacttc
ttgtcttatttgctgatcctggccgtcttcaccacggcggcgttctacagaaaagacgga
cagccgccgttcccagtggaaaacgtcccggcggatcacctccgctgcctcggtgagatc
atcagtgtcctgggagcagccaggtttctctataaaactataaccattttcaggaggaac
cccccaaacatcagctctctgtttactgacggattcactgaaattctgttttttctgcag
gcggccctgctgctgctgtgtgcggtcttgtactgctgcgggcggacagaatacgtcggg
ctgctcgtcttgtctctggctctcgcctggatgaatgttttatattacacacgaggctcc
aggcagctggggatctacaacgtcatgatgcagagaatgatcctgggcgaccttctgcac
ttcttatgcgtctacatcgtcctgctttttggattttctgctgccgtctgcaccctcatc
gatgactcacctggagggagtccgaccaacgactcggtcccacgacaaaggagttttaac
gtcgaaacgttcaaatgcgagaagccgagctacaacgacatcggcttcaccacgctggaa
ctgttcaagttcaccatcgggatgggagacctggagttcaccgaccacgtccagaaccag
acggtcttctacgtcctgctcatctgctacatcgtcctcacctacatcctgatgctcaac
atgctcatcgccctgatggggaacacggtggagagaatcaaggagcaaagccaaaccatc
tggaacctgcagagagcgttcaccatcctggacatggagaggactctgccgcggtggctg
aggacgaagctgcagtccgacgcgtcagagatggtctgcgtcaggaacgaccaggacgac
gcgcggagattcgtcagagtgacggaaataaactggaagaaatggcgctcggatgtcggc
gttaagctgaaggaagaacctgcaggtcagctgacgaccgcacgaaccgaggaggaaact
tctgggaatccgtggaacgtaaatgtgcttctccagaggattcgctccagacgacaggaa
gacagctacgttctctaa
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