Poecilia mexicana (shortfin molly): 106907112
Help
Entry
106907112 CDS
T08022
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106907112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106907112
03036 Chromosome and associated proteins [BR:
pmei03036
]
106907112
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106907112
Coactivators
SAGA/TFTC/STAGA complex
106907112
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
106907112
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
106907112
NCBI-ProteinID:
XP_014828145
Ensembl:
ENSPMEG00000015115
UniProt:
A0A3B3XKY9
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAGAPDPLEDMLSTEVDEKAVSDLVGSLESQLGDRNLPAASDPDGKRDVAAASRLSGKAG
SSEPQQGHQTAGSTREPGANQPLSGQTVPSSVTAGAIRNTGTGLQAAGAPSLTALPVPVT
LSSQPAASFPRAAVLAPSPVEAIRTSSPSLQPLNGSTGAGKVEGSPGAPPPGATLASQPG
LPAPQSPAGSPAVTLQGLPSPVISTAQNGLDPKGSASLSAAQVLNHNNPLMHTKMLVTST
PAPAPAAAQASIIQTQTGSSTPLAAAKPAINGVAQTGVRPPGAAVGAATSIQPQRPQLVT
ATTRPAAPQTALAVRPQQQTTIQLPPGFTIPPGMVLVRTETGQLVLVPQQALAQAQAKLQ
QSQTVVTQRPATPLTTSTIRVSTATTVPGAPQTVRLAAPAPTRIVQSPSTTSVQPLAVPA
AGAVKMPPPQKTSTVITAGVTPAAKPAPLPGGAATPPPAAPPGARVTVVSQEMQENVKKC
KNFLSTLIKLASHNSPSPDTSKNVKTLVQDLLDAKIEPEEFTSRLQAELKSSPQPYLIPF
LKKSLPALRQTLLNSQQSLTTAPPTTSAPPPAAPGSLTAAAIRPRLPVNATATTVRLTPP
ITNTAVGRATVQTIQTRSPVVLSQQIRHPATLLRGPTTMAGKAPVHLAAQANQKKPTDPG
GGTFRDDDDINDVASMAGVNLNEENARILATSSELVGTKIRSCKDEAFLPPGLLHRRILD
SAKKLGVTEVPLEVVNLISHATESRLRSLLEKASVIAQHRTDGAKDEGNLTYEQSSDVRS
QLRFFEALERMEKQRKDEQEREMLLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKLDSGGGASASSEVTSGSSSGSSASSSRQQLRQRITRVNLRDFI
LCLEQDRSSARSLMLYKALLK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcccccgacccgctggaggacatgctgtccaccgaggtggacgagaaggcg
gtcagcgacctggtgggctccctggagtcccagctgggcgacagaaacctccccgcggct
tctgatccggacgggaagcgggacgtggcggcggccagccgcctctcagggaaagcgggg
tcttcggagcctcaacaagggcaccaaaccgcggggtcgacccgggaaccgggcgccaac
cagcctctgtccgggcaaaccgttccctcctctgttaccgccggggcaataagaaacacc
ggaaccggtttgcaagcggcaggagcgccctctttgaccgctttacccgtaccggtaact
ctgagcagccagcccgctgctagcttcccccgggctgctgtcctggctcccagcccggtg
gaggcaatccggacctcttcccccagcttacagcccctgaacggcagcaccggagccggg
aaagtggagggctcacccggtgcccctccacccggcgcgaccctggcttcacaacccgga
ctccctgctcctcaatcccctgcgggctcccctgctgtgaccctacaggggctccccagc
cccgtgatcagcaccgcccagaacggtttggacccgaagggttcagcctccctatcagcc
gctcaggtcctgaaccacaacaaccctctaatgcacaccaagatgctggtgaccagcacc
ccggctccggctccggctgcagcccaggcctccatcatccagacccagaccggatccagc
acacccctcgcagcagccaagccggccatcaacggagtggctcagaccggggtgaggccg
cccggtgctgctgttggggcggccacctccatccagccgcagagaccccagctggtgacc
gccacaacccggccggctgccccgcagaccgccctggctgtccggcctcagcagcagaca
accatccagctgccgcccggcttcaccatccctccaggtatggttctggtccggaccgag
acgggtcagctggtcttggtccctcagcaggctctggcccaggcccaggccaagctgcag
cagagtcagacggtggtcacccagagacccgcaacaccgctgacaacatcgactatccgg
gtcagcaccgccaccacggtgcccggagccccccagacggtccggctggctgcacccgct
cccaccagaatagtccagtctccttccaccacctctgttcagcccctcgctgttcctgct
gccggagccgtgaagatgccgccgcctcagaaaacctccacggtgatcacggcgggggtg
acgcccgccgccaagcctgcaccgctacccggcggcgccgccacgccccctcccgctgcc
ccgcctggcgccagggtcaccgtggtgtcgcaggaaatgcaggaaaacgtgaagaaatgc
aagaacttcttgtccacgctcatcaagctggcgtcgcataactccccgtctcccgatacg
tccaagaatgtgaagaccctcgttcaggacctgcttgacgcaaagatcgaacccgaggag
ttcacgtctcggctgcaggctgagctgaagtcctccccacagccctacctcatccccttc
ctcaagaaaagcctccctgctctgcgtcagactctgctcaacagccagcagtctctgact
acggctccgcccaccacctcagctccgcctccagccgcccccggctccctcaccgcagca
gccatcaggccgcggctgcccgtcaacgccacggcaaccacggtccgcctgactccaccc
atcacaaacacggctgtgggcagagctacagtccagaccatccagacccgttctcctgtg
gtcctcagtcagcaaatcagacatccagccacactcttgcggggacccaccaccatggca
ggtaaagctcctgtccacctggcagctcaggccaatcagaagaaaccgactgaccccggg
ggcgggaccttcagagacgacgacgacatcaacgatgtggcttcaatggccggagtcaac
cttaacgaggaaaacgcccgtatcctagcaaccagctcagagctcgtcggcaccaagatc
cggtcctgtaaagacgaagcgtttctgccgccaggccttctgcaccgccgcatcctggac
tcagccaagaagctgggcgtgacggaggtgcctctggaggtcgtgaacctcatctcacac
gccaccgaatccagactgcgctcgctgctggaaaaggcctctgtgatcgctcagcaccgc
acagacggtgcaaaggatgaaggaaacctgacctatgagcagtcgtcggacgttcgctcc
cagctgcggttcttcgaagcgctggagcggatggagaagcagcggaaagacgagcaggaa
cgcgagatgctgctgaaggccgccaagagtcgggcccggcaggaggatccggagcaggct
cggctgaagcagaaggctaaagagatgcagcagcaggaactggctcagatgcgacagcga
gacgccaacctcacggcgcttgccgccatcgggccgagaaagaaacgcaagttggactca
ggaggcggagcttcagcgagcagcgaggtgacatcgggatccagttccggctcctctgcc
tcctcatcccggcagcagctccggcagcggatcactcgggtcaacctcagggacttcatc
ctgtgtctggagcaggaccgcagctcggcccgctccctcatgctctacaaggccctcctg
aagtga
DBGET
integrated database retrieval system
