Poecilia mexicana (shortfin molly): 106907348
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Entry
106907348 CDS
T08022
Name
(RefSeq) embryonic polyadenylate-binding protein B-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106907348
09123 Folding, sorting and degradation
03018 RNA degradation
106907348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106907348
03041 Spliceosome [BR:
pmei03041
]
106907348
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106907348
mRNA cycle factors
Stress granule specific factors
106907348
Spliceosome [BR:
pmei03041
]
Complex C
Other components
Complex C specific factors
106907348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_10
RRM_3
RBD_RDR6
YflT
Motif
Other DBs
NCBI-GeneID:
106907348
NCBI-ProteinID:
XP_014828488
Ensembl:
ENSPMEG00000007677
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MNGSGPAYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQ
QPADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFS
AFGNILSCKVVCDEKGSKGYGFVHFETQEAANRAIETMNGMLLNDRKVQKMGKKESGIVN
PKDRFLWEKCQFSQLRSANRFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLK
EVFSAFGRTLSVRVMKDEKGQSRGFGFVNYAHHEDAQKAVDEMNGKELNGKTIYVGRAQK
RLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDGINDERLRKEFSPYGTITSAKVMTE
GGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKYMQRLAT
LRTMSNPIIDSYPQSGYYMTVPQPPTRSFYNHSAVSNLRPVPRWMGQPPRTQGPYSAQYI
GSPLPRRGSPTITTVRQASTQAPRIITSSQKTTLPSDNIGTQTGGVPRGNQYKYSSGVRN
PLHVVTVPAIMTRPQVAPAPEPAVHIPGPEPLTASILAAAPLMDQKQLLGERLYPLIHAL
HPNLAGKITGMLLEIDNSELLHMLESPESLNSKVEEAIAVLQAHKAKECSPKK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcagcggtccagcgtatcctctggcctctttgtatgtcggggacctgcaccct
gatgttacagaagccatgctgtatcagaagttttctcctgctggacccatcatgtcgatc
cgcgtgtgccgggacatcatcacccgcagatccctaggatacgcctatataaacttccag
cagccagctgacgcggagtgtgccttagatacgatgaactatgacgtcattaagggtcga
cccattcggataatgtggtctcagcgtgacccaggtctcaggaagtccggtgtgggaaac
atctttatcaaaaacatggatgagtccattgacaacaaggcgctgtatgatactttctct
gcctttggcaatattttatcctgcaaggttgtctgtgatgagaagggatcaaaaggctat
ggctttgttcactttgagactcaggaggctgcaaatcgggccattgaaacaatgaatggg
atgcttctgaatgacaggaaagttcaaaagatgggtaaaaaggaatctggtattgtcaac
ccaaaggaccgtttcctgtgggaaaaatgtcagttctcccagcttaggtcagcaaatagg
tttgttggccacttcaagtctcgcaaggaaagggaagttgagtttggctccaaagctatg
aagtttaccaatgtctacatcaagaactttggagaggacttcactgacgagaaactgaag
gaggttttttctgcttttgggaggaccctcagtgtgcgagtgatgaaggacgagaagggg
caatcaagagggtttgggtttgtcaactatgctcaccatgaggatgctcagaaggctgtg
gatgaaatgaatggaaaggagcttaatgggaagaccatctacgtaggtcgcgctcagaag
cgcttggagcgccagggggagctgaagcgcaagtttgaccagatcaaacaggatcgcatc
caacgctatcagggggtgaatctgtatgtgaagaacttggatgatggcataaatgatgaa
agactccggaaggaattttctccttatggtacaatcacaagtgctaaggtgatgactgaa
ggtggccaaagcaagggctttggcttcgtctgcttctcgtctccagaggaagcaaccaaa
gcagtgactgaaatgaacgggagaattgttgcgaccaagccactgtatgttgcgctggca
cagaggagggaggagcgtaaagctattctaactaacaagtacatgcagagactggctacc
ctgaggaccatgagcaaccccatcatcgactcgtacccccagtcgggatactacatgacc
gtaccacagcctcccactcgctctttctacaaccacagtgctgtcagcaacctgagacca
gtccctcgttggatggggcagccgcccagaacccagggaccttactcagcccagtatata
gggagtcctcttcctcggcgtggttcaccaaccatcactacagttcgacaagcttccact
caggctccacgcatcataacctcctcacaaaagacgactcttccttcagataacataggg
acgcagactggaggagtgcccagaggaaatcagtacaagtattcgtctggagtgaggaac
cctttgcatgttgttacggttcctgcgatcatgactagaccacaggttgctcctgcgcct
gaaccagcagtccacattccaggcccggagcccctcaccgcttcaatcctggctgcagct
ccactcatggatcagaaacaactccttggggagcgactgtatccattgattcacgccctt
cacccaaacctggcaggaaaaatcacagggatgctgctagagattgacaattcagagctg
ctgcacatgttggagtcaccggagtccctgaactctaaggtggaagaggcaatcgctgtc
ttgcaggctcacaaggcaaaagagtgttctccaaaaaagtga
DBGET
integrated database retrieval system
