Poecilia mexicana (shortfin molly): 106907762
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Entry
106907762 CDS
T08022
Symbol
pabpc4
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
pmei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106907762 (pabpc4)
09123 Folding, sorting and degradation
03018 RNA degradation
106907762 (pabpc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106907762 (pabpc4)
03041 Spliceosome [BR:
pmei03041
]
106907762 (pabpc4)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106907762 (pabpc4)
mRNA cycle factors
Stress granule specific factors
106907762 (pabpc4)
Spliceosome [BR:
pmei03041
]
Complex C
Other components
Complex C specific factors
106907762 (pabpc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_MUD2_C
RBD_DEAH11
RRM_occluded
RRM_5
RRM_7
RRM_10
RRM_ACIN1
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
106907762
NCBI-ProteinID:
XP_014829096
Ensembl:
ENSPMEG00000019739
UniProt:
A0A3B3XPN4
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNTATGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFS
QPADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIDKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFEKYGKTLSVKVMADSSGKSRGFGFVSFEK
HEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPTSGYFMPAVPQAQNRTT
YYAPNQLAQMRPNPRWQQQGGRGQGGFQGMPNSLRQPGPRANLRHMTPSSGAQGPRGAGQ
TMGPRQSMGVAGPRAMPPYKYATSVRNPNPQVVQPIVVQQTQPAVHVQGQEPLTASMLAA
APPQEQKQMLGERLFPLIQAMHANLAGKITGMLLEIDNSELLHMLESHESLRSKVEEAVA
VLQAHQAKKDATQKVGAMTTTAAATS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcgacagggagttatccgatggcttctctctacgttggcgacctgcaccca
gacataacggaggctatgctgtacgagaagttcagccccgccggaccggtgctctccatt
cgggtctgcagagacatgatcacccggcgctccctcggatatgcttatgtgaacttctcg
cagcccgctgacgcggaaagagccctagacaccatgaactttgacgtggtgaaagggaag
ccaatcaggatcatgtggtcgcagagagatccctccctcaggaagtccggcgtgggcaat
gttttcatcaagaaccttgacaagtccatcgacaacaaagccctgtacgacaccttctct
gcctttggcaacatcttatcgtgcaaggtggtgtgtgatgaaaacggatcaaagggctac
gcgtttgtccacttcgagacgcaggacgcagcagatcgcgccattgacaagatgaacggc
atgcttctgaatgaccgcaaggtgtttgtgggtcgttttaaatctcgaaaagaacgggag
gctgaactcggtgccaaagccaaggagtttaccaatgtttacatcaagaactttggtgat
gacatggacgacgaacgactaaaggaactttttgaaaaatacggtaaaaccctgagtgtg
aaggtgatggcagactcctcgggaaaatctaggggttttgggtttgttagcttcgagaaa
cacgaggatgctaacaaggctgtggaggaaatgaatggcaccgagctgaatggtaagacc
gtctttgtaggcagagctcagaagaagatggagcggcaggcggagctgaagaggaagttt
gagcagctcaaacaagaacgaatcagtcggtatcagggagtcaatctttacatcaagaac
cttgacgacacaatcgatgatgaaaaattgcgtaaggagttttctccatttggctccatt
acaagtgcgaaggtgatgttagaagaaggccgttcaaagggcttcggcttcgtctgcttc
tcttctcccgaggaggccaccaaggctgtgacagagatgaacggacgtatcgttggctct
aaacctctgtacgtcgctcttgctcagcgcaaagaggagcgcaaagctcacctcaccaac
cagtacatgcagcgcattgccggcatgagggccatgccggctaacgccatcatcaatcag
ttccagcccacaagtgggtacttcatgcccgccgtgccccaggcccagaacaggaccacg
tactatgcaccgaaccagctagctcagatgcggcccaacccacggtggcagcaacaaggt
ggtagaggtcaaggcggtttccaaggaatgcctaactcgctgcgccagcctggaccccgg
gccaatctcagacacatgactcccagcagcggtgcacagggcccacgaggtgccggtcag
accatgggtcctcgtcagtcgatgggagttgctggccccagggccatgcctccttacaaa
tatgccaccagtgtccgtaaccccaatccccaagtggtgcaacctattgtcgtacagcag
actcagccagctgtgcatgttcagggccaggagccgctcacggcctccatgctggctgct
gcgccgcctcaggaacagaaacagatgctaggggagcgtttgttcccgctgattcaggcc
atgcatgccaacttggcgggaaagatcactggcatgctgctggaaatcgacaactcggag
ctgctgcacatgctggagtcgcacgagtctctccgttcaaaggtggaggaagctgttgca
gtgctgcaggcccatcaagcaaagaaggatgctactcagaaagtaggtgccatgacgact
actgctgctgctacatcctaa
DBGET
integrated database retrieval system
