Poecilia mexicana (shortfin molly): 106907838
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Entry
106907838 CDS
T08022
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106907838 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106907838 (taf5l)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106907838 (taf5l)
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106907838 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
106907838 (taf5l)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106907838 (taf5l)
STAGA complex
106907838 (taf5l)
TFTC complex
106907838 (taf5l)
SAGA complex
106907838 (taf5l)
SLIK complex
106907838 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
TFIID_NTD2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
PROPPIN
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD_LRWD1
Nbas_N
Beta-prop_WDR75_2nd
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106907838
NCBI-ProteinID:
XP_014829199
Ensembl:
ENSPMEG00000017729
UniProt:
A0A3B3YUK1
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MKRVRAEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSTEELAAGLTVQTESGYANIVSAA
PCQPDPQQYEVQFSRLRCFLSETEISYAQEVSSLLYPLFVYLHLDMVHCSLKGAVDSFYV
RFHDAFLHDGEQRSVVEQLRHVVTAQDVAANPKLRSFLEHKYVVHLTEPAHSYLLRYLQS
DDNSAICRALSTHLQVEVTASRRTEYQLYGAAAGSMAAANAGSWAGGGGGEGGTEAVEVP
AGIPQNEVALLALQDCIKKVREGPPSLTTICFYAFHHTDQMLNAAEVSPDSRLLAAGFDS
SAVKLWSLRARKLKAKPHQADVSYIHLACDVQEEEVDEEDGCGSEVKMLRGHSGPVYRTA
FLTDSSGLLSCSEDSTIRYWDLGSFTNTVLYQGHGYPVWDLDISPCSLYFASGSHDRTAR
LWTFSRSYPLRLYVGHLSDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGQSVRLFTGHRG
AVLALAFSPNGKYLASAGEDQRVKLWDLAAGTLFKELRGHADSITSLSFSPDSSLVASSS
IDNSVRVWDIRSTHGGAPAADGSSGELVGQYVGNTSNVLNVQFMACNLLLVTGTALEKTE
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgggtccgggccgagcagatccagtacgctgtggctcagtacctgaagaggaga
cagtatgtggatactgacggctccctgaaaggagccaaactcttccagtccacagaagag
ctggctgctggtctgactgtgcagacggagtcgggctatgccaacattgtctctgctgct
ccctgccagcccgacccgcagcagtatgaggtccagttctccaggctccgctgcttcctc
tcagaaacagaaatctcatatgcccaggaggtcagcagcctcctctacccgctcttcgtt
tatcttcaccttgacatggtgcactgcagtctgaagggggcagtagacagcttctacgtc
cgttttcacgacgcctttcttcacgacggggagcagcggtcggtggtggagcagctccgc
cacgttgtcacggcgcaggacgtcgccgccaatcccaagctgaggtctttcctggagcat
aagtatgtggttcacctgacggagccggcgcacagctacctgctgcgctacctgcagagc
gacgacaacagtgccatctgcagggcgctcagcacacacctgcaggtggaggtcaccgct
tccaggcgaaccgagtaccagctgtacggagccgccgctggctccatggcggccgccaac
gccggctcctgggcgggcggaggcggaggcgagggcggcaccgaggcggtggaggttccc
gccgggatcccgcagaacgaagtggcgcttctggcgctgcaggactgcatcaagaaagtc
cgtgaaggcccgccgtcgctcaccaccatctgcttctacgccttccaccacacggatcag
atgctgaacgcggcagaggtttcgccggacagccggctgctggcggccgggttcgacagc
tccgccgtgaagctgtggagcctccgggccaggaagctgaaggccaaaccgcaccaggcc
gacgtgtcgtacatccacctggcgtgcgacgtgcaagaggaggaggtggacgaggaggac
ggctgcggcagcgaggtgaagatgctgcgtggccacagcggtcccgtctatcgcactgcc
ttcctgaccgacagctccggcctgctgtcctgctccgaggactcgaccatccgctactgg
gacctgggcagcttcaccaacacggtgctgtaccagggccacggctacccggtgtgggac
ctggacatcagcccctgcagcctctacttcgccagcggctcccacgaccgcaccgcccgc
ctctggaccttctcgcgctcctaccctctgcggctctatgtcggccacctgtccgacgtc
gactgcgtcaagttccaccccaactccaactacctggccaccggctccacggacaaaacg
gtgcggctgtggagcacccagcagggccagtcggtgcggctcttcacgggccaccgcggc
gctgtgctggcgctcgccttttcgccgaacgggaagtacctggcgtcggccggcgaggac
cagcgggtgaagctgtgggacctggcggcggggacgctgttcaaagagctgcgcggccac
gcggacagcatcaccagcctgtccttcagcccggacagcagcctggtggcgtcttcctcc
atagacaactccgtccgcgtctgggacatccgcagcacgcacggcggggcgccggctgcc
gacggctcgtccggcgagctggtgggtcagtacgtgggaaacaccagcaacgtcctgaac
gtccagttcatggcctgcaacctgctgctggtcacaggaacggcgctggagaaaaccgag
ccgtag
DBGET
integrated database retrieval system
