KEGG   Poecilia mexicana (shortfin molly): 106908228
Entry
106908228         CDS       T08022                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    106908228 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmei03019]
    106908228 (cstf1)
Messenger RNA biogenesis [BR:pmei03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     106908228 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta ANAPC4_WD40 Beta-prop_EML EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_EIPR1 PAC11 ASA1 Beta-prop_DCAF4 CFAP251_N WD40_RFWD3 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_NWD2_C Ge1_WD40 DSE1_N Beta-prop_SPT8 PROPPIN Frtz Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 106908228
NCBI-ProteinID: XP_014829752
Ensembl: ENSPMEG00000004861
UniProt: A0A3B3WLL0
LinkDB
Position
Unknown
AA seq 358 aa
MYRPKPTLKDRQHLYRLIISQLLHDGYTNIANNLINEVKPQSVVSPSEQLMQLAKIGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPSEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDTISGVSYNPTANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGKERPNTQGGMSQ
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtatcgtcctaagccgactctgaaggaccgacagcacctgtacaggctcatcattagc
cagctcctccacgacggctacaccaacatcgccaacaatcttatcaatgaggtgaagccg
cagagcgtcgtgtcgccttctgaacagctgatgcagctggcaaagatagggatggagaac
gacgacagtgctgtccagtatgccatcggccgctcagacacagtagcgcctggtgttggc
attgacttggagtttgacgcagatgtccagacgatgtccccggaggcgtcggagtacgag
acctgctacgtcacgtcacacaagggtccttgtcgcgtggccacgtacagccgagacggc
cagctgatcgccacaggctcggctgacgcctccatcaagattctggacacggagcgcatg
ctggctaagagtgccatgcccatcgaggtgatgatgaacgagacggcgcagcagaacatg
gagaaccatcccgtcattcgtacgctttatgaccatgtggatgaagtcacctgcctggcc
ttccatccgagtgaacagattctagcatctggctcaagagactacaccctgaaactgttt
gactactccaagccctctgctaaaagagcttttaaatatatacaggaagcggaaatgctg
cgttcgatctccttccacccctccggggacttcctgttggtgggaacgcagcaccctacg
ctgcgcctctacgatgtcaacactttccagtgctttgtttcctgcaacccgctagaccag
cacacggacacaatcagtggcgtcagctacaaccccaccgccaacagctacgtcacctgc
agcaaggacggcagcatcaagctgtgggacggcgtctccaaccgctgcgtcaccaccttt
gagaaggcgcacgacggagcagaggtgtgctccgccatcttttccaagaactccaagtac
atcctgtccagtgggaaggactccgtggccaaactgtgggagatctccaccggtcggacc
ttggtcaagtacacgggtaaggagcgtccgaacactcagggaggaatgtcacaataa

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