KEGG   Poecilia mexicana (shortfin molly): 106908743
Entry
106908743         CDS       T08022                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmei03009]
    106908743 (wdr18)
Ribosome biogenesis [BR:pmei03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    106908743 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_alt Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_VPS8 WDR54 Beta-prop_Vps41 Beta-prop_DCAF12 Ge1_WD40 SCAB-ABD KNTC1_N
Other DBs
NCBI-GeneID: 106908743
NCBI-ProteinID: XP_014830409
Ensembl: ENSPMEG00000013896
LinkDB
Position
Unknown
AA seq 430 aa
MAAPLEVVISSDSGSQLWNCTVFDLHSGSSLLSYRGGNSAARSLAVLRGEFLLSAQLGKN
FINVWEIQRKDQLQQKIVCPGVVTCLTASPDGAFLAAGVAEAVYLWEVCTGKLLAVLSRH
YQDVTCLKFTDDSSHFVSAGKDNLALVWNVCSVVQMDLSHAPEPRHVLSRHSLPITDLHC
GHMGAQARVATSSLDQTAKVWELSSGELLLSVLFDVEIMSVTFDPSEYFLFCGGRDGNIF
QVSLCSQSLNREKSFQSDGEGNQVFKGHRSLVTCLSVSMDGTLLLSGSQDETARLWDVQS
RQSVRCLAHKGPVTNAVIMAVSANMFLPDSRPAVPLPRFSRHLQAPEGPDAEGGGAWVRP
ALHTQEEEESYLQKADRLYSLMHAVSDKALCGDGENSALRVAELEEEVQTLKKVNKDLFE
FSSQLLTKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaggtggtaatcagcagcgattcgggctcccagctctggaactgc
accgtcttcgacctccacagcggctccagcctgctctcctaccggggagggaactctgcg
gcccggagcctcgccgtcctgcggggggagtttctgctcagcgcgcagctggggaaaaac
ttcatcaatgtgtgggagatccagaggaaggaccagctgcagcagaagatcgtctgtcca
ggtgtggtcacctgtctcaccgcctcacctgacggggctttcctcgctgcaggagtcgcc
gaggcggtctacctgtgggaggtgtgcacaggtaagctgctggcggtgctcagtcgacac
tatcaggacgtcacgtgtctgaagttcaccgacgacagcagccattttgtttctgcgggc
aaagacaacctggcgctggtgtggaacgtgtgcagtgtggtccagatggatttaagccac
gcccccgaaccacgccacgtcctgtcccgccattctctgccaatcacagacctgcactgt
ggtcacatgggagctcaggccagagtcgccacgtcatcgctcgaccagaccgcaaaggtg
tgggagctctcctcaggtgagctgctgctgtccgtcctctttgacgtggagatcatgtcg
gtaacctttgacccctcagagtacttcctgttctgtggaggacgtgatgggaacattttt
caggtgtctctctgcagccagagtctgaaccgggagaagtcgttccagtcggacggcgag
ggaaaccaggtgttcaagggccacaggagcctggtcacctgcctctccgtgtccatggac
gggacactgctgctgtccgggtcgcaggacgagacggcccgcctctgggacgtccagagc
cggcagagcgtccgctgcctcgcacacaaaggtcctgtgaccaacgccgtcatcatggcc
gtctcagctaacatgttcctgccggacagtcggcccgccgtcccgctgccgcgcttcagc
cgacacctgcaggcccccgagggccctgacgccgaggggggcggggcctgggtccgcccc
gccctccatacacaggaggaggaggagtcgtacctgcagaaggccgacaggttgtactcc
ctgatgcacgctgtgagcgacaaggcactctgcggtgatggtgagaactcggcgctgcga
gtcgctgagctggaggaggaagtccagacactgaagaaggtcaacaaagatctgtttgag
ttttcatctcagctgctcaccaagcccacatga

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