Poecilia mexicana (shortfin molly): 106908786
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Entry
106908786 CDS
T08022
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmei04812
]
106908786 (katnb1)
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106908786 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
PEP5_VPS11_N
RMC1_N
Beta-prop_WDR35_TULP_N
PROPPIN
WDR54
Beta-prop_NWD2_C
Beta-prop_LRRK2
Beta-prop_IP5PC_F
Beta-prop_VPS8
Ge1_WD40
WD_LRWD1
Beta-prop_IFT122_2nd
Beta-prop_NUP159_NUP214
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
106908786
NCBI-ProteinID:
XP_014830487
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAAASSTKISWRLQEFEAHSRTVSCLSLGKNSGRLLATGGEDCRVNIWAVSKANCVMSLT
GHKNPVECVQFSASEEQVAAGSQSGSIRVWDLEAAKILRTLMGHKANVTSLGFHPFGNFL
ASSSVDTNIKLWDVRRKGYVFRYKGHTEAVRSLAFSPDGKWLASASDDCTVKLWDLFQGK
TITEFKSHSAAVSAVQFHPNEYLLASGSADRSIKLWDLEKFTMVGSLEGDTSAVRCLLFS
PDGSCLYSGTSDSLRVFGWEPDRCFDTVPVGWAKVSDLAVCNQQLIGVSHQLSSVSSFVV
DLKRVKRSGGAVIQGIVRDDRPLTDPAEPRAAALRRNYDRPATACSSHRMKRSDTDRRSP
DGERRSQSEDEAEDKQPSAEIHNADDYREIFQPKHAISRTPPRMSEPFPAPPEDESVVAV
GRQLKDMMLPSPDKQQAPPLATSTPVQRVEPTVVAVTKPCSPAPSSQPAPPTRPPPLPRV
IPSSRNEPLGLNVADFLPSPASHRGGALTDDGALAQINKGHDTMCVMLSSRQRNLQTVRS
VWTRDDVKSALDAAVSMNDLSIVVDVLNIVNLQPSLWKLDLCTTVLPQIDKLLQSKYESY
MQTGSTSLKLIMKHFWTLICDTLRASPAVGVDITREERHQKCRECCRYLKNLSNVVKNRA
GQAGRHGSAFKELQLLMAPLDEAL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccagcagcaccaagatctcatggcgcctgcaggagttcgaggcccactcc
agaaccgtgtcctgcctgtctctggggaagaactcgggccgtctgctggccacggggggt
gaggactgccgggtcaacatctgggccgtcagcaaggccaactgcgtcatgagcttgacg
ggtcataagaacccggtggagtgcgtccagttcagcgcgtcagaggagcaggttgcagct
ggttcccagtctggatccattcgagtctgggacctggaggccgccaagatcctgcggact
ctgatgggacacaaagcgaatgtcaccagtctgggcttccacccgtttggaaacttcctg
gcctccagctctgtggacacaaacatcaagctctgggacgtccggaggaaaggatacgtg
tttcgctacaagggtcacacagaggctgtgaggagtttggccttcagtccggacgggaag
tggttagcctcggctagcgacgactgcaccgtgaagctgtgggacctgttccaggggaaa
accatcaccgagttcaagtcgcactcggcggccgtcagcgcagtccagttccatcctaac
gagtacctgcttgcgtccggcagcgccgacaggagcatcaagctgtgggacctggagaag
ttcaccatggtcggctctctggagggagacacgtctgccgtgaggtgcctgctgttcagc
ccggatggctcctgcctctacagcggcacctcggactccctccgggttttcggctgggaa
ccggaccgatgtttcgacacggtcccagtcggctgggcaaaagtatcggacctggccgtc
tgcaaccagcagctgattggcgtgtcccaccagctgtccagcgtctcgtccttcgtggtg
gacctgaagcgggtgaagcggagcggtggcgccgtgatccagggtatcgtccgggacgac
cggccgcttaccgatccagcagaacccagggcggcggcactgcggcgcaactacgacaga
cccgccactgcctgcagctcccacagaatgaagcgctcggacaccgataggcggagcccc
gatggagagaggcggagccagagcgaggacgaggcggaggacaagcagccgtcggcagag
atccacaacgccgacgactacagagagatcttccagcccaaacacgccatctctcgaact
cctcccaggatgtcggagccgtttccagctcctcctgaagacgagagcgtggtggccgtc
ggccggcagctgaaggacatgatgctgccgtctcctgacaagcagcaggctccgcccctc
gccacctccacccccgtccagagggtcgaacccacggtcgtcgccgtcaccaagccgtgt
agccccgcccccagcagccagcctgccccgcccaccaggccgccaccgttgccacgggtg
atcccgagcagccgcaacgagccgctgggactcaacgtggccgacttcctgccgtcccca
gccagccaccggggcggcgctctcacagacgatggcgctctggcacagatcaacaaaggt
cacgacaccatgtgtgtgatgctgagcagccgccagcgcaacctgcagacggtccggtcc
gtctggacccgcgacgacgtcaagagcgctctggacgctgccgtgtccatgaacgatctg
tccatcgtagtggacgtcctgaacatcgtcaacctgcagccctccttgtggaaactggac
ctctgcaccacggttctccctcagatcgacaagctgctgcagagcaaatacgagagctac
atgcagaccggctccacgtcgctgaagctcatcatgaaacatttctggactctgatctgc
gatacgctcagggcgtcgccggcggtgggggtggacatcaccagggaggagcggcaccag
aagtgccgggagtgctgccgctacctgaagaacctgagcaacgtggtgaagaaccgggcc
ggccaggccggtcgccatggcagcgccttcaaggagctgcagctgctgatggcgccgctg
gacgaggcgctgtga
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integrated database retrieval system
