Poecilia mexicana (shortfin molly): 106909478
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Entry
106909478 CDS
T08022
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
106909478
NCBI-ProteinID:
XP_014831331
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MVAVPLRFFCHVIFLLQPYVMNTADGGAYYGPKPPPQQQPQPIPHYSDDFPQQQFLGNEM
PHSSFSKGIPSLSQYGKDAPQLPVPLQIGKMRPLTKGKGQTFPRGSKGPLPVPGGKGFTD
GHQGIEGPPGPVGPPGPQGPPGLPGHGIPGSPGKPGPPGPQGYRGNGKPGIPGFPGKPGG
PGLPGAKGDLGPIGGQGPTGLPGPPGFPGPTGLPGISKSGGQGLPGLPGQPGEPGQNGPP
GFPGPQGLKGDKGLGLPGFPGVNGPGGQPGPPGQVGLPGNGKPGLNGVPGQPGFPGKPGP
PGEAGLVGAPGQRGQPGLPGVPGIGKPGKDGVRGLPGFFGGKGEPGPPGLIGPPGLPGYG
KAGFPGPKGHKGHAGLPGQPGPKGVKGQVGQPGVIGLTGLTGIPGVPGPTGPPGSLGFPG
QKGEDGTFGPRGNPGMKGETGPPGLSGQPGRPGEGGQPGQRGFQGPIGPKGEAGARGLPG
APGAAGLQGPRGEGGESGNKGQSGPQGIPGLTGPGGPIGPPGRPGQKGETGPTGNPGYPG
NGTPGTPGEIGPQGNAGPSGPPGLPGQPGPPGPPGPPGIPAESPDIIQFLPHTGPYNGQG
HKKPGNGVEISGTKQQIPAFTSKLTNPFPLVGSPITFDKLLHNGNQDYNPQSGIFTCSIP
GIYYFAYHIHCKGGNVWVALMKNSEPIMYTYDEYKKGFLDQASGSAVLPLKKGDTVHVEL
PSDQAAGLYAGQYVHSTFSGYLLYLM
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgtacctctccgtttcttctgtcatgtcatctttctactccagccatatgta
atgaacacagctgatgggggagcatattatggaccaaagccaccacctcagcagcagcct
cagcccatcccgcattacagcgatgactttcctcagcagcagttcctggggaacgagatg
ccgcattcatctttcagcaaagggatcccatcactgtcacagtacggaaaagacgctcca
caactgccagtgcctttgcaaattggaaaaatgagaccattgacaaaaggcaaaggacaa
accttcccaaggggatctaaaggtcctcttcctgttcctggtgggaaaggtttcacagat
ggacatcaaggcattgaaggcccccctggaccagtgggcccaccaggtccacaaggcccc
cctggacttccaggacatgggattcctggatcaccaggaaagccaggtcccccaggtcct
cagggatacaggggaaatggaaaacctggaatcccaggattccctggaaaacctggaggc
cctggattaccaggagcaaaaggggatcttggaccaattggtggtcaagggccaacagga
cttcctgggcctccaggattcccaggtcccactggactccctggaatttcaaaatcagga
ggccaggggttaccaggactgccagggcaaccaggagaacctggccaaaatggtccacct
gggtttcctggtcctcaaggtctaaaaggcgataaagggcttggtctgcctggttttcca
ggtgtgaatggacctggtgggcaacctggtccacctggacaagtgggcctccctggcaat
ggcaaacctggtctgaatggtgtacctggacagccaggatttccaggaaaaccaggtccg
cctggagaagcagggctagtaggagcaccaggtcaaagagggcaaccaggacttccaggt
gtaccaggaataggaaaaccaggaaaagatggtgttagagggttaccagggttctttgga
ggaaaaggcgaaccagggcctcctggtttaattggaccaccaggcttgccaggttatggt
aaagcaggatttccagggcctaagggtcacaagggacatgctggtcttccaggacaacca
ggcccaaaaggtgtcaaaggtcaagtaggtcaacctggagttattggtctaactggtttg
acaggaatacctggtgtaccagggcccaccgggcctcctggtagtcttggcttcccagga
cagaagggagaagatggcacatttggccctagaggaaatcctggaatgaagggtgaaact
ggacctcctggtctttcaggacagccaggtaggccaggagagggtggacaaccgggacaa
agaggattccaagggccaatagggccaaaaggagaagctggggctagaggtttacctggt
gcccctggtgctgcaggattacaaggaccaagaggagagggaggagagtctggaaacaag
ggtcagtcaggtccacaggggatccctggacttacaggaccagggggaccaattggacct
cctggtcgtccaggacaaaaaggtgaaacaggaccaacaggtaaccctggttatcctggt
aatgggaccccaggaacccctggtgaaattggtcctcaaggaaacgctggtcccagcggt
cctcctggacttcctggacaacccggtcctccaggtcctcccggccctccaggaatacct
gctgaatctcctgacattattcaattcctccctcacacaggcccctacaatggacaaggt
cacaaaaagccaggcaatggagttgagattagtggaaccaagcagcagattcctgcattc
acctcaaaactgacaaatccattccctctagtaggttccccaatcacatttgacaaactt
ctccacaacggaaatcaggactacaatccacaaagtggtatttttacatgtagtatacca
ggaatctattattttgcttaccacattcactgcaagggaggcaacgtttgggtggctctg
atgaagaacagtgagccaataatgtacacttacgacgagtacaaaaagggtttccttgat
caggcttcaggaagcgctgtactcccactgaaaaaaggagacactgttcatgtagagctg
ccatcagaccaggcagcaggactttatgctggtcagtatgtccattccacattttctgga
tacttactgtacttgatgtaa
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