Poecilia mexicana (shortfin molly): 106909697
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Entry
106909697 CDS
T08022
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04622
RIG-I-like receptor signaling pathway
pmei05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106909697 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106909697 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pmei04054
]
106909697 (ifih1)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106909697 (ifih1)
Pattern recognition receptors [BR:
pmei04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
106909697 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
DEAD
ResIII
Helicase_C
SWI2_SNF2
CARD
C1_4
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106909697
NCBI-ProteinID:
XP_014831621
Ensembl:
ENSPMEG00000016070
UniProt:
A0A3B3XFI4
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MTSDNDEILERRIECLKPRLRQIIKVDQVLQYLHLESGRKEAIRQKLNTEGNESAADLLI
GAVVERPHPVGWFRAFVDALNHGGSAHAGDYLELNLPDPEVEAENDYYVQLIQLFTPSLE
DMKTEEVLTQCLARFLLTAADQERIEAEKTNHGNRRGAHELLNRIVRCRPGWFSEFREIL
RFTEHKHLYELIGGSPECKKPKNEAKAAEEKPAENCQSEESMEISGTEGSQDDAPDLYLD
GDLSKSMDNLPPDVSGCPGAEAAGATGGGPEEISLRDYQMEVARPALEGENVIICLPTGS
GKTRVAVYITQKHLDSRRAEGKPGKVVVLVNKIPLVEQHFSTEFRILKLTYKVERVSGDS
QLKISFANIVERNDIIICTAQILENYLERASSGEDEGVKLSDLTLIIIDECHHTQKGEVY
NHIMMRYLKQKHKNKKLLKEQKKPMPLPQILGLTASPGVGGAKTLNKAEEHILRICANLD
ASKIMTGSIVKKEQRKSILPVESRKEDPFGCVVKTIMTAIHEHARLFPTCDLGSQNYEQW
AVQKEREAAKDGDQTVRVCAEYLRRYNEGLILSNTIRMCDALSFLNKFHEEQIKKKTSPD
DEQNMEITETERFLFNLFKDKKEELEKLAKDPTYENDSLSKLRTKILQEFSSRKEARGII
FTKTRHSAMTLSQWIQENPKFADIEVKPSYFIGGGDQSDTKPMTAAEQKDVLKRFKSGEL
NLLIATTVAEEGLDITACNFVIRYGHVTNEIAMIQSQGRGRAEDSTYTVVDVKNSGVAEK
EYVNEYREQMMNKAIQKIKKLDQSVYNKQITEFQIQAIMEERVRQVNQKKKAVKDENPSS
VKFSCRHCTKYICSGEDIQIIENMHRVNVTQQFRKLFIQRENASLQERRLDYETNGVIAC
SGCGQTWGSMMFYRGIELPCLHVKNFVVDINKKKYSNCTRWNDLPVKFPDFDYIEHASLM
AQGSDDEVTE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgataatgatgagatacttgaacgtcgcattgaatgtttaaaaccgagactc
cggcagattataaaggtagaccaggtactgcaatatttacatttagaatctggacgaaag
gaggcgatcagacagaaactgaacacggagggtaatgaatcggctgcggatttgcttatc
ggtgcggttgttgagaggccacatccagtcggctggttcagggccttcgttgatgcgttg
aatcatggaggcagcgctcacgctggtgactatttggagttaaacctcccagaccccgaa
gtggaggcggaaaatgattactatgtccagctaattcagttatttactcccagtctggag
gacatgaaaacagaagaagtgttgactcagtgcttagctcgatttctcctaactgctgcg
gaccaagagaggattgaggctgaaaaaacaaaccacggaaacagacgtggagcccatgaa
cttttgaacaggatcgtgagatgccgacctggctggttctctgaatttcgggaaattctg
cgtttcactgaacacaaacacctttatgagctcattggaggatcacctgagtgtaagaaa
ccgaaaaatgaagcaaaagcagcagaggagaaaccggccgaaaactgtcagagtgaggag
tccatggaaatcagtggcaccgagggatctcaggatgatgccccagatctgtatttagac
ggtgacctgtccaaatccatggataatttacccccagatgtaagcggctgtccaggagca
gaagcagcaggggccaccggaggaggcccagaagaaatttctcttcgtgattatcagatg
gaagttgccaggcctgccttggagggggaaaacgttattatttgcctcccgacaggaagc
ggtaaaaccagagttgcagtgtacataacccaaaaacatctggacagcaggagagctgag
gggaaaccagggaaggtggttgtcctggtgaacaagattcctcttgtggagcagcatttc
tccacagagttccgtatcctgaagctcacgtacaaagtggagagggtcagtggagactct
cagctcaaaatctccttcgctaacattgtagaaagaaacgacatcatcatctgcacagcc
cagattctcgaaaattacttggagagggcttccagcggagaggatgaaggggtgaagcta
agcgatctgacactgatcataatagatgaatgtcaccacactcagaaaggagaagtctac
aaccacatcatgatgaggtacctgaaacaaaagcacaagaacaaaaagctcctgaaggag
cagaagaagcccatgccgcttcctcagatcctgggcctgacggcctcaccgggggtcgga
ggtgccaaaaccctgaataaagctgaagagcacattctgcgaatttgtgcaaacttggat
gcttccaaaattatgacaggaagcattgtgaaaaaggaacaacgaaaatccatcctgcct
gttgaatcgagaaaagaggatccctttggttgtgtggtgaagacaatcatgactgccatt
cacgagcatgcccggcttttccccacatgtgacctgggctctcagaattacgaacaatgg
gctgttcaaaaagagcgagaagctgccaaagatggagaccagacagtgcgggtctgcgcg
gagtacctccgacggtataatgaaggtctgattttaagcaacaccatacgcatgtgtgac
gctctcagtttcctgaacaagttccacgaggagcagatcaagaagaaaacgtcaccagat
gacgaacagaacatggaaataacagagacggagagatttttgttcaatttgtttaaagac
aaaaaggaagagctggagaagctggcaaaggatccaacatacgaaaacgacagtctgtca
aaactcagaactaaaattttacaagagttcagcagccgaaaagaagccagagggatcatt
ttcaccaaaacacgtcacagcgctatgactcttagccagtggattcaagaaaaccccaag
tttgctgacatcgaagtaaaaccttcttatttcattggaggaggagaccagagcgatacc
aaaccaatgacagctgcagagcagaaggatgtgctgaagaggttcaaaagcggtgaactc
aacctccttattgctaccacagtggcagaagaaggtttggacataacggcctgcaatttt
gttattcgatatggccatgtgaccaatgaaatcgctatgattcagtctcaaggcagagga
agagctgaggacagcacatacactgtcgtggacgtaaagaactcaggggtggctgaaaag
gagtatgtcaacgagtaccgtgagcaaatgatgaacaaagccattcagaaaattaaaaaa
ttagatcaatcagtttacaacaaacaaatcacagagtttcagatacaggctataatggag
gaaagagtgagacaggtaaatcagaagaagaaggctgttaaggatgagaacccgtcttct
gtaaagtttagctgtcgtcactgcaccaaatacatctgcagcggcgaagacatccaaatc
attgaaaacatgcacagagtcaatgttacgcaacagtttaggaaacttttcatccagaga
gaaaacgcatctcttcaggagcgacgtttggactacgagaccaatggtgtcatagcttgc
agtggctgtggtcagacatggggttcaatgatgttttaccgtgggattgagctgccttgt
ctccatgtgaaaaactttgtggtggatataaataagaaaaagtacagcaactgcaccagg
tggaacgaccttcctgtcaagtttcctgacttcgactacatcgaacacgccagcctgatg
gcacagggctcggacgatgaagtcacagagtga
DBGET
integrated database retrieval system
