Poecilia mexicana (shortfin molly): 106909781
Help
Entry
106909781 CDS
T08022
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106909781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmei03021
]
106909781
03036 Chromosome and associated proteins [BR:
pmei03036
]
106909781
Transcription machinery [BR:
pmei03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106909781
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106909781
PBAF complex
106909781
GBAF(ncBAF) complex
106909781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
K_channel_TID
Chromo
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
106909781
NCBI-ProteinID:
XP_014831729
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MATSATTAGGTGSGGGTAGLVGGGTAVARKKDGGPSTKFWESSETISQLETVRLWIGKHY
KKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPPLTKLPAKCFLDFKAGGTLCHILG
SVYKYKSEQGWRRFDLQNPSRMDRNVEMFLNVEKHLVQNNCLTRPLVYLSPEIEQKQVSK
LKDIIKRHQGSVTEDKSKATHHIHPSLTQQEDEEWLRPVMRKDKQVLVHWGFYPDSYDTW
VSAGEVDGDVEDPPSSEKPWKVHAKWVLDTDAFNEWMNEEDYELDENKKPVSFRQRIFPK
EEESSRTPDRKERKANSASKKRRRSPSPPSTPAESRKKGGKKGNPGPHWKRRGHRGEEED
TEEDMTKDMDDSSAGASMEDGVSKNANSKKDSENTPVKGGNMADLDDMEDDSVLSGGKDD
DEQGKGEVNRMDAGEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDAESR
PLPMGPPPTPHFTVLADTPSGLMPLNHRPPPIPPPQPMPNFADKSKDKPIDLQNFGLRPD
LYKKIAKQGKGAGTTREWTEQETLLLLEALEMFKDDWNKVSEHVGSRTQDECILHFLRLP
IEDPYLESTETSLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRV
REEVPAELVEAHVKKVQEAARSTGKVDPTFGLESSGIAGTAPEEPEKTETAEPEKMETDS
DSQQADKAEMKDEAEKPSESAEKSDKTESTEKVKKEGAEGSEHEQEKEEEGETKTASADK
DKDETMDTSSSDQEKEKEDKTATEEGEEKQKKLEHDIGEGNIATAAAAALASAATKAKHL
AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHM
EQLKYAEMKARQQMEQQAAAAAAAAAAAAAQAQGQGSGPGPHPGPPPHGMHHGGPPPHHG
GPPPAHHGGPPPHHGGPPPHHGGPPPGAAMHPGFPPMGHHPMAPHQTGQRSL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcggcgacaacagcaggcgggacgggctcaggcggaggaaccgcgggtctg
gtcggcggcggaacggcggtagcccgaaagaaagacggtggaccttctacgaaattttgg
gaaagttcggaaacaatttctcagcttgagacggtgcgactttggatcggaaagcactac
aagaagtatgtccagaatgactctccatccagtaagtccctggctggcctggtggtccag
ctgcttcagtttcaagaggatgcgtttggacgcagggtcaacaatcctcctcttaccaag
ctacctgccaaatgtttccttgatttcaaggcaggaggaactctctgtcacatcttggga
tcagtatacaagtataaaagtgagcagggctggaggagatttgacctgcagaatccgtct
cggatggaccggaatgtggaaatgttcctaaatgttgaaaaacacctggtccagaataac
tgcctgacacggcccctcgtctacctgtcgccagaaattgagcagaagcaagtcagcaag
ctcaaagacatcatcaagaggcaccagggttcggtcactgaggacaagtcaaaggcaact
catcacattcacccatctttgacacagcaggaagacgaggagtggctgcgtccggtcatg
aggaaggacaagcaggtcctcgttcactggggcttctacccagacagctatgacacctgg
gtatccgccggtgaggtggatggtgatgtggaagatcctcccagctctgagaaaccttgg
aaggttcatgccaaatgggttttagacacagatgccttcaatgagtggatgaatgaggaa
gactatgagctggacgagaacaaaaagcctgtcagcttccgacagagaatcttccccaaa
gaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggcaaactctgcgagcaag
aagaggaggcgctcgccctcgccgcccagcactccagccgagtcccgaaaaaaaggagga
aagaaggggaacccagggcctcactggaagcgacggggacacagaggagaggaagaggac
actgaggaggacatgacgaaggacatggatgactcctctgctggcgccagcatggaggat
ggtgtgtccaagaatgctaattcaaaaaaagacagtgaaaatactccagtcaagggaggg
aatatggcagatttggatgacatggaggatgattcggtgctgtccggtggcaaggatgat
gatgaacagggcaaaggagaagtcaatcggatggatgctggagaggacaatgtaactgag
cagacgcatcacatcatcattcccagttatgctgcctggttcgactacaacagcatccat
gagattgagaggagagctcttccagagttctttaatgggaagaacaaatccaagactcca
gaaatatacctggcctatcgtaacttcatgatcgacacgtaccggctgaaccctcaggag
tacctgacctccacttcctgtcgcagaaacctgactggggacgtctgtgccatcatgagg
gttcatgcattcctggagcagtggggtttggtaaattaccaggtggatgctgagagtcgg
ccgttacccatgggcccccctcccacaccccacttcactgtgctggctgacactccctct
ggcctcatgcccctcaaccaccggcctccacctattcctcctcctcagccaatgcccaac
tttgcagataagtccaaagacaaaccgattgacttgcagaactttggtctccgccctgac
ctctacaagaaaattgccaaacagggaaaaggagccggtaccaccagagaatggaccgag
caagagactctgctgctgcttgaggccctggaaatgttcaaagacgactggaacaaagtg
tcggagcatgttggttctcgcacccaggatgaatgtatcctgcacttcctgcggctgccc
attgaggatccgtacctggagagcacagaaacgtctctgggccctctggcctaccagccc
attcccttcagccagtccggaaacccagtaatgagcacagtcgccttcctggcctctgtg
gtggatcccagagtggcgtctgctgcagccaaggcagctttagaggagttttctcgcgtg
cgtgaggaagttcctgccgagttggtggaagctcacgtcaagaaggtccaggaggcagca
aggagcaccggcaaggtggatcccaccttcggcctggagagcagcggcatcgcaggaacc
gcaccggaggagcccgaaaaaacagaaaccgcagaaccagaaaagatggaaacagattca
gactcccaacaggctgataaggctgagatgaaggatgaggcggaaaagcccagtgagtcg
gcagagaaaagcgacaagacggagagcacggaaaaggtgaagaaggagggagcagaggga
tcagagcatgaacaggagaaggaggaagaaggagagaccaaaacagcttcagcagataaa
gataaggatgaaactatggacacctcatcttcagatcaagagaaggagaaagaggacaag
acggctactgaggagggagaggaaaagcagaagaagttggagcatgacatcggagaggga
aacatcgccacagcggccgctgctgctctcgcttctgcagccaccaaagccaagcacttg
gcggcggttgaagaaaggaaaattaagtccctggttgctctgctggtggaaacccagatg
aagaagttggaaatcaagctgaggcacttcgaagagctggagaccatcatggaccgcgaa
aaggaagctctggagcttcagcggcagcagctcctcactgagcgccaggcgttccacatg
gagcagctgaaatacgccgagatgaaggccagacaacagatggagcagcaagccgctgcc
gccgccgccgctgctgctgctgccgctgcccaggctcaaggtcagggctctggacccgga
ccccaccccggaccccctccacatggtatgcatcacggcggacccccgccccaccacggc
ggccctcctcctgctcaccatggaggaccaccgccccaccacggcgggcctcccccccac
catggaggaccgccaccaggtgctgcaatgcatcctgggttccctccaatgggccaccat
cccatggccccccaccagacaggtcagaggtcactttaa
DBGET
integrated database retrieval system
