Poecilia mexicana (shortfin molly): 106909783
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Entry
106909783 CDS
T08022
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106909783 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106909783 (wdr33)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106909783 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_TEP1_2nd
ANAPC4_WD40
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
eIF2A
WD40_RFWD3
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR41
PEP5_VPS11_N
Ge1_WD40
DUF8689
Motif
Other DBs
NCBI-GeneID:
106909783
NCBI-ProteinID:
XP_014831730
Ensembl:
ENSPMEG00000004789
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MATDVGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPLGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HSGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
AGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDVEPNSLATIPGMGIPEQLKAAMEQEQSSKEAAAEVEMSIPGLDWGMDE
VMGRDSKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPSADLSKDRNLEQKVEGKKKTQA
ELEQEMAALQYTNPHLLEQMKMSQMNSDGNMGPPQGPGSMPPFPGPGGPGPPGQQGYAPN
MPHQQMAPPMGPAGMQQPFMQPGQMGPPSGPPSHQGPPQGMVGPSDMQEPQRHPGPPRHM
GPPGPHGMGPRGMQGPPGGMMGHPPRGIGLRDPQGPPPQGNMISPQGQMQGGMMGPPPRT
HGNMPNNYGMGNMQGPQGGMQGPPYMQHQGQNSGPMMHGMGPQGPNNKGDHRGPPPNHHM
GPTDRQGPGGPGGPGGPDQGSYWGDGQQGRRGPQDGGQDFHSRGEDSWRPGYQGGGHRGG
GHRGGGAWGSDDRFGVGDFRGRRDDRFRGGGPGRGGRGYTEDYSGQEEGFDGGEEVGRGW
ESGGRGRPPRGGGPPRGGGHDGFRDDGSSPGGRERPSSMQGMDMASLPPRKRPWQDGPGT
GDHEAPDGGGRPQRDDGGYGPPGRGGRGGWGPAGGAGLRRGGPPPRGGPRAGGRGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagacgtgggctcgccgcagcggttcttccacatgccgcgcttccagcaccag
gcgccgcggcaggtgttctacaagcggcccgacttcgcgcagcagcaggccatgcagcag
ctcaccttcgacgggaagcgcatgaggaaggccgtcaaccgcaagaccatcgactacaac
ccgtccgtcatcagatacctggagaaccgcctgtggcagcgcgaccaccgggacttcagg
gccatccagcccgacgccggctgctacaacgacctggttccccctctgggaatgctcaac
aacccgatgaacgccgtcaccaccaagttcgtccggacctccaccaacaaagtcaagtgt
cccgtctttgtcatcaggtggacccctgagggccgccggctggtgaccggggcctccagt
ggagagttcaccctatggaacggactcaccttcaactttgagaccatcctacaggcccat
gacagcccggtgcgggccatgacctggtcccacaacgacatgtggatgctgacggcggac
cacagcggctacgtcaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccatcagagaagccagcttctctcccactgacaacaagttcgccacctgc
tccgatgacggcaccgtccggatctgggacttcctgcgctgccacgaggagcggatcctt
cgaggtcacggcgccgacgtgaagtgcgtggactggcaccccaccaaggggctggtggtg
tccggcagcaaggacagccagcagcccatcaagttctgggaccccaagacgggtcagagc
ctggccacgctccacgcccacaagaacacggtgatggaggtgaagtggaacctgaacggg
aactggctgctgacggcgtcccgcgaccacctctgcaaactcttcgacatccggaacctg
aaggaggagctgcaggtgttccggggccacaagaaggaggccacagcggtcgcctggcac
ccggtccatgagggtttgttcgccagcggaggctccgacgggtcgctgctgttctggcac
gccggggtggagaaggaggtgggcggcatggagatggcccatgaagggatgatctggagt
ctggcctggcaccctctgggtcacatcctgtgttctggttccaacgaccacaccagtaag
ttctggaccaggaaccgacccggggacaagatgagagaccggtacaacctgaacctgctt
cccgggatgtcggaggacggcgtggagtacgatgatgtggaacccaacagcctggctacc
attcctgggatgggcatcccggagcagctgaaggcggccatggagcaggagcagagcagt
aaagaggcggctgccgaggtggagatgtccatccctggactggactggggcatggacgag
gtgatgggacgggactccaagaaggttcctcagaagaaggttccttacgccaaaccgatc
ccggcgcagttccagcaggcttgggcggagaacaaagttcccatgatgcccccgtctgca
gatctgtcaaaggaccggaacctggagcagaaggtggaggggaagaagaagacccaggcg
gagctggagcaggagatggcggcgctgcagtacaccaacccccacctgctggagcaaatg
aagatgagccagatgaactcggatggaaatatgggccccccccagggaccgggctccatg
cccccctttccgggccccggggggccgggccctcctggtcagcagggctacgctccaaac
atgcctcaccagcagatggcgccccccatgggccccgcagggatgcagcagccctttatg
cagcctggacagatggggcctccttctggacccccatctcatcaggggccccctcaaggc
atggtgggcccctcagacatgcaagaaccacagagacatcctggcccaccgagacacatg
ggccccccaggacctcatgggatggggcccagaggcatgcaggggccccctggtgggatg
atggggcatcctcctcgaggaattggtttaagggaccctcaagggcccccgccccaaggg
aacatgataagtccccagggccaaatgcagggtggaatgatggggcccccacccaggaca
cacggcaacatgcctaataactatgggatgggcaacatgcaggggccccaaggaggcatg
caggggcccccgtacatgcagcaccagggccagaactcaggacccatgatgcatgggatg
gggccccagggccccaacaacaaaggagaccatcgagggccgcccccgaaccaccacatg
ggtcccacagaccggcagggacccggggggcccggaggcccgggggggccagaccaaggc
tcttactggggagacggccagcagggccggaggggccctcaggatggaggacaggacttc
cacagccggggggaggacagctggaggccggggtaccaaggggggggccaccggggggga
gggcaccgggggggcggggcctggggctccgacgaccgcttcggtgtgggggacttcaga
ggacggcgggacgacaggttccgagggggcgggccgggccgaggggggcggggctacacc
gaggactacagcggccaggaggagggctttgacggcggcgaggaggtcggccgaggctgg
gagtccgggggccgagggaggcccccccgaggaggagggcccccgcggggaggaggccat
gacgggtttcgggacgacggttcgtctccgggcgggcgggagcgtccctcgtccatgcag
gggatggacatggcgtccctgccgccccgtaagcgtccctggcaggacggccccgggacc
ggggaccacgaggctccagacggaggcggacgacctcagagggacgacggcggctacggc
ccccccgggcggggcgggcggggtggctggggccccgcggggggggcggggctgaggagg
gggggaccaccccccaggggggggccgagggccggcgggcggggccggtag
DBGET
integrated database retrieval system
