Poecilia mexicana (shortfin molly): 106911200
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Entry
106911200 CDS
T08022
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04140
Autophagy - animal
pmei04148
Efferocytosis
pmei05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106911200 (vps11)
04148 Efferocytosis
106911200 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106911200 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106911200 (vps11)
Membrane trafficking [BR:
pmei04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106911200 (vps11)
Hops complex
106911200 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-C3HC4
TPR_GEMI5
zf-ANAPC11
zf-RING_5
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
TSGP1
Rab11-FIP3
zf_RING_Vps8_fungal
Beta-prop_HPS5
zf-RING-like
CC_Bre1
Kbp-5
Motif
Other DBs
NCBI-GeneID:
106911200
NCBI-ProteinID:
XP_014833465
Ensembl:
ENSPMEG00000009518
UniProt:
A0A3B3WYJ8
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MAAFLQWRKFVFFDKDTVKDPADSGKTFILPKRISASDSGRGHVVLGDMEGQIWLMTRSL
QLTSFQAYKLRVTHLFQLKQHSILVSVGQDEHGINPLVKVWNLDKRDSGNPLCTRIFPAV
PNNKPAEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPVTGLAFR
QMAKVTHLFVATLEKVFCYTLSNKEYPKVELDTHGCALCCSSLADPSQDSQFIVAGDECV
YLYQPDERGPCFAFDGHKLLTHWHRGYLFLLIKDVKSPNKSGFGSGESSLSEKQVLTIYD
LDNKFIAYSASFDDVIDVLAEWGSFYILTRDGKMFILQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTTGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSSESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHQHHEWYLKIQLEDLKNYQEGLRYIGRLPFEQTESNMKRYGKTLMHHV
PEGTTLLLKRLCTNYHPNENLMEKVSLDSSLLNKANSEEFIPIFANNPRELKAFLEHMIE
VDPRSSQGVYDTLLELRLQDWAHEQDPEKKKVCQGEALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVDACKRYGDLEGCLWEQALGYFARKEEDCK
TYISEVLHHIDQKNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQRESQQIEDDERKICQ
YRQETSHLRSEIQELKASAKIFQKTKCNMCNSPLELPSVHFLCSHSFHQHCFESYAESDA
ECPTCTPENRKVMDLLRAQDQKRDLHDHFNRQLRSSNDGFSVVADYFGRGVFNKLTLVTD
PPGSKTVGSLEVNLQRDLLIHTKRN
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatttctacagtggagaaaatttgtcttctttgataaggacacggtgaaggat
cctgcagatagcggaaaaacctttattcttcctaaaagaatctcggcgagtgactccggc
cggggacatgttgttctgggagatatggaaggacagatttggctgatgacgcgctccctg
cagttgacgtcattccaggcgtacaagctgcgggtgactcacttgttccagctgaaacag
cacagtatcctggtatcagtgggacaggatgaacatggcattaatcctctggtgaaggtt
tggaaccttgacaagagagacagtgggaatccactctgcaccagaatctttcctgcagtt
cccaacaataaaccagctgaagtatcttgtctcagtgtacatgagaacctgaacttcatg
gctataggcttcacagatggcagcgtggttttaaccaaaggggacatcaccagagaccgt
cacagtaaaactctgactctgcatgagggaacctcccctgtcacaggcctggccttccgc
caaatggcaaaagttacacatttgtttgttgccactctggaaaaagtcttttgctacact
ctgtctaacaaggagtatccaaaggtagagctggatacccatggctgcgccctgtgctgc
tcatccctggcagatccgtctcaggattcccagttcattgtggctggggatgaatgtgtt
tatctgtaccagcctgatgaacgagggccctgctttgctttcgatggccacaagctgttg
acccattggcaccggggatacttgttcctgctgatcaaagatgtgaagtcacccaacaaa
tcagggtttggcagcggcgagagctcactgtcagaaaagcaagttttaacaatctatgac
ctggacaacaaattcatcgcctacagcgcctcattcgatgatgtcattgatgtgttggca
gaatggggatccttctacattctgacccgagacgggaaaatgtttattttgcaagagaag
gacacacagacaaaactggagatgctgttcaagaagaacttgtttgtcatggccataaac
ttggctaaaagccagcatctggacagtgacggtctgtcagagatctttcgacagtatggc
gatcatctgtacctgaagggagatcatgatggtgccatccagcaatatattcgcaccact
gggaagctggagccttcgtatgtcattaggaaatttctggatgcccaaaggatccacaac
ctgacggcatacctgcaggcccttcaccgccagtctctggccaatgcagaccacaccacg
ctgctgctgaactgctacaccaaactcaaagacagctccaagctggaagagttcatcaag
agcagcgagagtgaggtccattttgatgttgagattgctatcaaggttcttcgccaagct
ggataccacagtcatgctgtgtttctagctgaacgccaccagcatcatgagtggtacctg
aagatccagctggaggacctgaagaactatcaggaaggtttgcggtacattggccgtctg
ccttttgagcaaactgaaagcaacatgaagcgctatggcaagacactcatgcaccatgtt
cctgaaggcaccacattgctcctgaagcgcttatgcaccaactatcatccaaatgaaaac
ttgatggaaaaagtcagcctggacagtagtctacttaacaaggcaaattctgaagaattc
atcccaatttttgccaataaccctcgtgagctgaaagccttcctggagcatatgattgag
gtggaccctcgttcatcccagggtgtgtatgacacactgttggagctccgactgcaagac
tgggcacatgaacaagaccctgagaaaaaaaaggtgtgccagggagaagccctttcactg
ctcagaagtgacaacactgtgtttgataaggccttggtcctttgccagatgcacaacttt
aaagaaggtgtcctctacctgtatgagaaaggcaaactttaccagcaaatcatgcattac
cacatgcagaatgaggagtatggaaaagttgtagatgcctgcaaacgttacggagacctg
gagggctgcctttgggagcaagctctcggatactttgccagaaaagaggaggactgtaag
acctatatcagtgaggtcctacatcacattgaccagaaaaacctcatgcctccattactt
gtcgtgcagacactggcacacaactcaacggctactctgtcggttatcaaagactacctc
atcaataagctgcagagagagagccagcagatagaagatgacgagcgtaaaatttgccag
taccgtcaggaaacttctcatctccgctctgaaatccaggagctgaaggcgagtgccaag
atattccagaagactaagtgcaacatgtgtaacagccccttggagcttccatctgtacac
ttcctgtgtagtcactcctttcaccagcactgctttgaaagttatgcagagagcgatgcc
gagtgtccaacatgcactccagaaaaccgcaaagtcatggatctgctgcgcgctcaagac
cagaaacgggatctccatgaccatttcaatcgacagctccgaagctccaatgatggtttc
tctgtggtggctgattattttggtcgaggagtgtttaacaaactgacgctggtaactgac
cctccagggagcaaaactgttggaagtctagaagtcaacctgcagcgagacctgctgatc
cacaccaagagaaactga
DBGET
integrated database retrieval system
