Poecilia mexicana (shortfin molly): 106911360
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Entry
106911360 CDS
T08022
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106911360 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106911360 (cpsf2)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106911360 (cpsf2)
U7-dependent histone pre-mRNA processing factors
106911360 (cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
106911360
NCBI-ProteinID:
XP_014833637
Ensembl:
ENSPMEG00000012100
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MTSIIKLTAVSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDAMKRYVHQVDAVLL
SHPDPIHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRNNSEDFTLFTLDDVD
SAFDKIQQLKYSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCTLESISRPSLLITDSFNAAYVQPRRKQRDEQLLTNVMETLRGNGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYPLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLNLCHSLADLARVPSPKVVLCSQPDLESGFSRELFTQWCQNAKNSIILTYRTT
PGTLARYLIDNPGEKMLDLEVRKRVKLEGKELDEYLEKEKIKKEAAKKMEQAKEVDVDSS
DESDMEDDLDQPAAVKTKHHDLMMKGEGSRKGSFFKQAKKSYPMFPVHEERIKWDEYGEI
IRIEDFLVPELQATEEEKNKLESGLTNGDEPMDQDLSVVPTKCVSSVENFEIRARVTYID
YEGRSDGDSIKKIINQMKPRQLVIVHGPPEASLDLAESCKAFSKDIKVYTPKLQETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDTELAWIDGVLDMRVAKVDTGVMLEEGVKEEAEDGE
VPMDTAPELGIDHNATAVAAQRAMKNLFGEDEKEMSEESDVIPTLEPLPPTEISGHQSVF
INEPRLSDFKQVLLREGIQAEFVGGVLVCNNVVAVRRTEPGRIGLEGCLCDDYYKIRELL
YHQYAVV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattatcaagctgacagccgtgtcgggggtccaggaggagtcggctctttgc
tacctgctgcaggtggatgaatttcgcttcctcctggactgtggatgggacgagaacttc
tcaatggacattattgatgccatgaagcgatatgttcaccaggttgatgcagtcctgctg
tcgcaccctgaccccattcacctgggagccctgccctacgctgtgggcaaactgggtctg
aactgcaccatctacgccaccattcctgtctacaaaatgggtcagatgttcatgtacgat
ctatatcagtcaagaaacaacagtgaagatttcacgctcttcaccctggatgacgtggac
agtgcttttgataaaatccagcagctgaaatactcacagattgtcaatctgaaaggaaag
gggcatggtctgtcgatcactcctctcccagccggacacatgatcggaggcaccatttgg
aaaattgtcaaggacggggaggaggaaatagtttatgcagtggacttcaatcataagaga
gaaatccaccttaacggctgcacactggagagcattagtcgaccgtctttgctcattaca
gattccttcaatgctgcttatgtgcagccacgccgcaaacaaagagacgagcagctgctt
acgaacgtaatggagaccctgcgtggtaatggtaatgtccttattgccgtggatacggcc
ggccgcgtgctggagctggcgcagctcctcgaccagatttggaggacgaaggacgctggg
ctcggcgtttacccactagcgctgctcaacaacgtcagctacaacgtggtggagttctcc
aagtcccaggtggaatggatgagtgacaaactcatgaggtgttttgaggacaaaaggaac
aatccgttccagttccgacacttgaacctttgccacagtctggcagacctggcccgggta
cccagtcccaaggtggtgctttgcagccaaccggaccttgagtctggcttctccagggag
ctcttcacccagtggtgccaaaatgctaaaaattccatcatccttacctaccgcaccacg
cctggcaccctggcccgctatctcatcgacaatcctggagaaaagatgctggatttggag
gtcaggaaacgagtaaaactggaagggaaggagctggacgagtatcttgaaaaggagaaa
ataaagaaggaagcagctaaaaaaatggaacaagccaaagaggtggatgtggattcgagc
gatgagagcgacatggaagacgatctggatcagccggctgcggtgaaaaccaagcatcat
gacctgatgatgaagggcgaggggagccgcaaaggaagcttcttcaaacaggccaaaaag
tcataccccatgttcccggtgcatgaggagagaatcaaatgggacgagtatggagaaatc
atcaggattgaagactttttggttcctgaactgcaagccacagaagaggagaagaacaaa
ctggaatctgggctgacaaatggcgacgaacccatggaccaggatttgtctgtcgttcct
acaaaatgtgtctcaagtgttgagaattttgaaataagagcgagggtgacgtacatagac
tacgaaggtcgctccgatggcgactccataaagaagatcataaatcagatgaagcccaga
cagcttgtgattgttcacgggccaccagaagcaagtctggacctggccgagtcctgcaag
gctttcagcaaagacatcaaagtttacacacccaaactgcaggagactgtggacgccacc
agcgagacgcacatctaccaggtgcggctgaaagactccctggtgagctctctgcagttc
tgcaaggccaaagacacggagctggcctggatcgacggcgtgctggacatgcgcgtggcc
aaggtggacaccggcgtgatgctggaggagggcgtgaaagaggaggcggaggacggcgag
gttcccatggacaccgcccctgagcttggcatcgaccataacgccacggccgtggcggcg
cagcgcgccatgaagaacctgtttggagaggacgagaaggagatgtcggaggagagcgac
gtcattcccactctagagccgctgcctcccactgagatttcaggccatcagtctgtgttc
atcaacgagcctcggctgtctgacttcaagcaggtcttgctgagagagggcatccaggct
gaatttgtgggtggagttctggtgtgcaacaacgtggtggccgtccgcaggacggagcct
ggacgcatcggcctagaaggctgcctgtgtgacgactactataagatccgggagctgctt
tatcatcagtacgctgttgtgtag
DBGET
integrated database retrieval system
