Poecilia mexicana (shortfin molly): 106911431
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Entry
106911431 CDS
T08022
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106911431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106911431
04121 Ubiquitin system [BR:
pmei04121
]
106911431
03036 Chromosome and associated proteins [BR:
pmei03036
]
106911431
03400 DNA repair and recombination proteins [BR:
pmei03400
]
106911431
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
106911431
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
106911431
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106911431
DNA repair and recombination proteins [BR:
pmei03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
106911431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
zf-RING_6
Ank_5
Ank_4
Ank_3
zf-RING_5
zf-RING_10
PTCB-BRCT
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106911431
NCBI-ProteinID:
XP_014833719
Ensembl:
ENSPMEG00000005299
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MDNTTSLQTDDWKNTKEAVANFRRLLLCSKCSNVMEEPVCLGMCEHMLCRSCAGPRAGDG
CAVCLSPAWVKDIQINRQLSSIIQLFSDLESLLNPTEQADSSVAEVSSQAEAAVLKHKKN
FKIWFSPRSRKVRCKVEKPLEVTAPDRKSSEEQPAAQSKVPTAQCRDLSVFNFTSSSQDS
SSSQNERNVNSKGKKRTKKTATTRQVQGRTSTTRRQTKENLKKKRLEAINQQWGITDQQN
PSSGPEPSCADGARGSRKRVSFLSPSVSTDGAQTEASQVRELSLTNRTTNESLSGGEINV
LSHHSQHGQSTSSQMSSTNNPNPDDGSKTDTNGSPQESLSKRSKTVERNCSLETTPKRQR
ASSGQRRKSPGGKASPFTERLTLASPPSEKKKKRPREGKQRSPSAAALMSSDSHNKPVCS
PRSAFGRSSPGSPAVMKRNHRGETPLHLAAIKGDVDSVKELLDQGADPNLKDNAGWTPLH
EACNLGHLGAVKVLVARGALLNTPGYENDSPLHDAVRNGHAAIVKLLLQLGASQNVLNLH
GKRPADYAVSQEMLAIFQEAAEGTQYANSHTSHSPSATISTSSESARRDQTLMLLASKLS
SPEQRQLVKLGVLLGGRIVDTFSGSVSHVVVPEGQMPTTYSTLLGLLAGCWVVKYSCKYE
VSC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggacaataccacatcgctacaaacagatgactggaagaacactaaagaggcggttgca
aacttccgtcgactgttgctttgctccaaatgctcaaatgtgatggaggagccggtgtgt
ctggggatgtgcgagcatatgctgtgcaggtcgtgtgctggcccccgggcaggagacggc
tgcgccgtgtgtctcagccctgcgtgggtgaaggacatccaaatcaacaggcagcttagc
agcatcatacagctcttcagtgacttggagtccctgcttaatcccacggaacaagcagac
tcctctgttgctgaggtcagttcgcaggcggaagctgcagtcctaaaacacaagaagaac
tttaagatctggttcagtcctcgcagtcgaaaggtgcgctgcaaggtcgagaagccttta
gaggtcactgctccagacaggaagtcctctgaagaacagcctgctgctcagtccaaagtc
cccacagctcagtgccgggacctttcagtgtttaatttcacttcgtcctcccaagactct
tcgtcttcacaaaatgaaaggaatgtaaacagtaaaggaaagaaaagaactaagaaaact
gctactacaaggcaggttcaagggcgcaccagtaccacacgtagacagactaaagagaat
ttgaaaaagaagaggctggaggccataaaccagcagtggggaattacagaccaacaaaat
ccctcatctggaccagagccatcctgtgctgatggagcaagagggtcccgtaaaagggtt
tctttcttaagcccttctgtctcgactgacggggcccagactgaagcctcgcaggtccgt
gaactcagtttgaccaaccgcacaacaaacgaaagtctctcgggaggggagatcaatgtg
ctgagtcaccacagccagcatggtcagagcacatccagtcagatgtcgtcaacaaacaac
ccaaatccagatgacggttccaaaacagacacaaacgggtctccccaggagagtctctcc
aaaagaagcaaaacagtggagagaaactgctccttggaaacaacgccaaaaagacagagg
gcttcttcgggccaaaggagaaaatcacctggtggaaaagcctcacctttcactgagcgt
ttaactttagcaagccccccaagtgaaaagaaaaagaaacgcccgagagaaggtaaacag
cgtagtccgtctgctgcagccctcatgtcttcagacagccacaataaacccgtgtgcagt
cctcggtcagctttcggccgttcaagccctggcagccctgcagtaatgaagaggaaccac
agaggagagacccctctacatcttgctgcaataaagggagatgtagattctgtcaaagaa
cttctggatcagggagccgaccccaacctgaaagataacgccggctggacaccactgcat
gaggcatgtaatctgggccacctgggagctgtgaaggtcttggttgcgaggggagccctg
ttgaacacacctggctatgaaaatgattctccgctccatgatgctgtgaggaatggacat
gcagccattgttaagctgctgctgcagctcggtgcctcacagaacgttcttaatctacat
ggaaagcgtcctgcagattacgcagtgagccaggagatgctggcgattttccaggaagct
gcagaaggaacccaatatgctaattctcatacatctcatagcccctcagccactatctcc
acgtcgagtgagagtgcgagaagggatcagactttaatgttattggccagcaagctatca
tcgccagagcagcgtcagctagtcaaactgggagtgctactgggaggaaggatcgttgat
accttttctggctcagtgagccatgtcgtcgtgccagaaggacaaatgcccaccacctac
tccaccctcctgggtcttcttgctggctgctgggttgtcaaatacagctgtaagtatgaa
gtgagctgctga
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integrated database retrieval system
