KEGG   Poecilia mexicana (shortfin molly): 106911555
Entry
106911555         CDS       T08022                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03030  DNA replication
pmei03410  Base excision repair
pmei03420  Nucleotide excision repair
pmei03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106911555 (rfc4)
   03410 Base excision repair
    106911555 (rfc4)
   03420 Nucleotide excision repair
    106911555 (rfc4)
   03430 Mismatch repair
    106911555 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmei03032]
    106911555 (rfc4)
   03036 Chromosome and associated proteins [BR:pmei03036]
    106911555 (rfc4)
   03400 DNA repair and recombination proteins [BR:pmei03400]
    106911555 (rfc4)
DNA replication proteins [BR:pmei03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106911555 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    106911555 (rfc4)
Chromosome and associated proteins [BR:pmei03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106911555 (rfc4)
DNA repair and recombination proteins [BR:pmei03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106911555 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    106911555 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_30 AAA_assoc_2 AAA_16 AAA_22 AAA_11 DUF815 Mg_chelatase AAA_24 AAA_19 SLFN-g3_helicase AAA_14 RuvB_N Gp44_lid AAA_5 AAA_28 Cdc6_lid ResIII wHTH-PRTase_assc AAA_7 AAA_3
Other DBs
NCBI-GeneID: 106911555
NCBI-ProteinID: XP_014833844
Ensembl: ENSPMEG00000001906
UniProt: A0A3B3WDT0
LinkDB
Position
Unknown
AA seq 357 aa
MQAFLKGATIQTSRPQKDKVTAGPSGEKKAKAVPWVEKYRPKCVDEVAFQDEVVTVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTHPNGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRSTRFCLICNYISR
IIEPLTSRCSKFRFKPLASQIQEERLLEICDKEKLKYTKASIAALVQLSEGDLRKAITFL
QSAARLNADKEITDQAIIEIAGVIPSKMIDKLLQICFRGTFEKLEVAVRNMVNEGYAATQ
ILSQLHDCILEKDITDEQKSAIFEKMAVVGKCLADGADEYLQMLSLCSVIMQQAGQS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcctttctgaaaggagcaactatccagaccagtagaccccagaaggataaggtg
acagcgggacccagtggtgagaagaaggcgaaggctgttccctgggtcgagaaatacaga
cccaaatgtgttgatgaggtggccttccaggatgaggtggtcacagtgctgaagaagtca
ctggaaggagcagatcttccaaaccttctcttctacggtcctcctggaacaggaaagact
tccaccatcttagctgctgccagagaactttatgggccggagctgtatcgacagagggtg
ctggagctgaatgcttcggatgaacgaggaattcaggtcatcagggagaaagtgaagaac
tttgctcagctcactgtggctgggacgcatccaaacggaaagccatgtcctccttttaag
atcatcatcctggacgaggcagactctatgacagctccagcacaagctgcgctcaggcgg
acaatggagaaggagtcccgctccacccgcttttgcctcatctgtaactacatcagcagg
attattgagcctcttacctccagatgttccaagtttcgtttcaaacctctggctagtcag
atccaagaagaacgtttactggaaatctgtgataaggagaagctcaagtacaccaaagcg
agcattgcagcgttggtgcagctgtctgagggggatctgaggaaagccatcacgtttctt
cagagcgcagcgcgtctcaacgctgacaaggaaatcactgaccaagctataattgagata
gcaggggtcattccttccaaaatgattgataaactgctccaaatctgcttcagaggaacg
tttgagaaactagaggtcgcagtgaggaacatggtgaatgaaggatatgcagccacacag
atcctgagtcagctccatgactgcatcttggaaaaggacattactgacgagcaaaagtca
gccatctttgaaaagatggcggttgtaggaaagtgccttgctgatggtgcagatgaatac
ctgcagatgctgagtttatgttcggtgatcatgcagcaggctggtcagagctaa

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