Poecilia mexicana (shortfin molly): 106911732 Help Entry 106911732         CDS       T08022                                  Symbol ddb1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism pmei  Poecilia mexicana (shortfin molly) Pathway pmei03420   Nucleotide excision repair pmei04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:pmei00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     106911732 (ddb1)   09124 Replication and repair    03420 Nucleotide excision repair     106911732 (ddb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pmei04121]     106911732 (ddb1)    03400 DNA repair and recombination proteins [BR:pmei03400]     106911732 (ddb1) Ubiquitin system [BR:pmei04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      106911732 (ddb1) DNA repair and recombination proteins [BR:pmei03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       106911732 (ddb1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       106911732 (ddb1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Glyco_trans_4_2 Motif Other DBs NCBI-GeneID:  106911732 NCBI-ProteinID:  XP_014834048 Ensembl:  ENSPMEG00000011398 LinkDB All DBs Position Unknown AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVTVMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHKQLIQITSGSVRLVV QDSKALVSEWKEPQGKNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVAC LDITPLGEGGNESTLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHET SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYSLSIVSCRLGKDPSVYFIVGTAMVYPEE PEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLTKVIKSVGKIEHSFWRSFHTER KTEQGTGFIDGDLIESFLDLSRAKMQEVVSTLLIDDGSGMKREATVDEVIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcttataactacgtggtaacagcacagaagcccacggcagtgaacgcctgcatcaca ggtcacttcacctctgctgaggaccttaatttgctcatcgctaaaaacacacgtctggag atctatgtggtcacagctgagggacttagacctgtcaaggaagttggcatgtatggcaaa attgctgtcatggagctcttccgtccaaagggtgagagcaaagacctgctgttcattctc acatccaagtacaacgcatgtatcctggaatacaaacagaacggggagagtattgacatc atcacccgtgcccatggcaacgtccaggatcgcattggacgtccatcagaaactgggatt attgggattgttgacccagaatgccgcatgattggtctgaggctgtacgacggattgttc aaggtgatcccgttggaccgggacaaccgagagctgaaggcgttcaacatccggctggag gagctgcaggtcatcgacgttcacttcttgtatggctgccaggctccgaccgtctgcttc atctaccaggaccctcaaggacgtcatgtaaagacctacgaagtttctctgagagagaag gagttcaacaagggcccttggaaacaggagaatgtcgaggctgaagcatccatggttatt ccagtgccagagccatttggtggcgctataatcataggacaagagtcaatcacctaccac aatggggacaaatacctggccattgctccaccaacaatcaagcaaagtaccattgtctgc cacaaccgggtggaccccaatgggtcgcgctacctgctgggagacatggagggtcgtctg ttcatgctgctcctggagaaggaggagctaatggacggcaccgtggctctgaaggacctg catgtggagctgctgggagagacctctatagctgagtgcttgacctacctggacaatggt gtggtgtttgttggatccagattgggagactcccagcttgtgaagcttaacgtggacagc aacgagcagggctcctacgtcacggtaatggagacgttcaccaatctggggcccattgtg gacatgtgtgtggtggacctggagaggcagggtcagggccagctggtgacatgctctggc gcgttcaaggagggttctctgcggatcatccgcaacggcattgggattcacgagcatgcc agcatcgacctgccgggaatcaaaggtttgtggccacttcgctctgaggcaggccgggag actgatgatatgttggtactgtctttcgtgggtcagacgagagtgttgatgctgagcgga gaggaggttgaggaaaccgagctgccaggttttgtggacaaccagcagacattttactgt ggaaatgttgcacacaaacaactcattcagatcacatcaggctctgtgcgcttggtggtc caggacagcaaggccttggttagtgaatggaaggagccgcagggcaagaacatcagcgta gccgcctgcaatcatacacaagtggtgctcgctgtgggacgagcattgtactacctgcag atcctcgcaggagagctcaaacagatcagcaccacagagatggagcatgaggtggcctgc ctggacatcacacctctgggggagggtggcaacgagtccacgctctgcgctgtgggactg tggaccgacatctctgcacgtgtgctcaaactgccctgtttcacggctctgcacaaggaa atgctgggtggagagatcatccctcgctccatcctaatgaccacctttgaaggcagctac tacctgctgtgtgccctgggagacggagcactcttctactttggtcttgacctacagact ggagccctcagcgagcgtaagaaggtcactcttggcacgcagcccaccgtgctgcggacc ttcagatcgctgtccacctcaaacgtcttcgcctgctccgaccggcccactgttatctac tcatccaaccacaagctggtgttttccaacgtcaatctgaaggaagtcaattacatgtgc ccactcaactctgagggctacccagacagtctggctttggccaacaacagcacactgacc atcggcaccattgatgaaattcaaaaactccatattcgcacagttcccctctacgagtct cccaggcggatctgttaccaggaggtttcacaatgtttcggggttctgtcgagccgggtg gagatccaggatgttagcggcaccacgtctgctgtacggcctagtgcaagcacacaggcg ctctccagcagtgtgagctccagcaagctcttccccagcagcacttctccacatgagacc tcctttggtgaggaggtggaggttcacagtctgctcgtcgtggatcaacacacctttgaa gtccttcatgcccatcagttcctccccagcgagtattctctcagcattgtgtcatgtcgc ctgggaaaagacccatctgtttacttcatcgtcggcacggccatggtttacccagaggag cccgagcccaagcagggtcgaatcattgtcttccattataccgacgggaagctgcaaacc gtggctgagaaagaagtgaaaggagccgtctattctatggtggagttcaatggaaaacta ctggccagcataaatagcacagtccgtctgtacgagtggacggctgagaaggagctgagg accgagtgcaaccactacaacaacatcatggcgctctacctgaagaccaaaggggatttc atcctggtgggagacctgatgaggtctgtcctgctgctggcgtacaaacccatggagggc aactttgaagagattgctcgtgactttaatccaaactggatgagtgccgtggaaattcta gacgatgacaacttcctgggagcagagaacgccttcaacttgttcgtctgccaaaaagat agtgcggccaccaccgacgaggagcgccagcatctgcaggaggtcggggtctttcaccta ggcgagtttgtaaatgtcttttgccatggctcactggtgctgcagaacctgggggagagc tccacacccacccagggatccgtactcttcggcaccgttaacggcatgatcggtctggta acgtctctgtccgagggctggtacagcctcctgcttgacctacagaaccgcctcaccaag gtcatcaaaagcgtgggcaagatcgagcacagcttctggaggtctttccacacggagcgc aagacggagcagggcacaggcttcatcgacggggacctgattgaaagcttcctggatctc agtcgggcaaagatgcaggaggtcgtcagcactctgctgatcgatgatggcagcggcatg aagcgtgaagccacagtggacgaggtgattaagattgtagaggagctgacgaggatccac tag

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