Poecilia mexicana (shortfin molly): 106913170
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Entry
106913170 CDS
T08022
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106913170 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmei03041
]
106913170 (dhx8)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106913170 (dhx8)
Spliceosome [BR:
pmei03041
]
Complex C
Other components
Step II factors
106913170 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
TsaE
PhoH
ABC_tran
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
106913170
NCBI-ProteinID:
XP_014835388
Ensembl:
ENSPMEG00000008166
UniProt:
A0A3B3YD41
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MCFRLKRKRKLLLHPICLPSSTFVEQKQDSWKMADGGVDELSQLEYLSLVSKVCTELDNH
LGINDKDLAEFVISLAEKQPSFDGFKALLLENGAEFTDSLISNLLRLIQTMRPPSKASTS
KASDVSIKPKSEKDRLKELFPALCKPNDPSPKRILDEDDVKVAADAMKELEMFMPSVSGA
DSKVSKSKSEKSRHRSRSRERERHRDRDRDRDRDRGGDRKRRHHSRSRSRSRSRSRDRHR
DRDRDRDRDRGKRKDKSSRWSDRSPSPKKDLDKDSDRWKDKHVDRPPPEEPSVGDIYNGK
VTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKT
SLSMKDVDQDTGEDLNPNRRRNMGPEGGEDVSMRNPDRPSNLNLGHAPELEQDDTLERKR
LTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIELVEEEPPFLR
GHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDSIPMGLNKHWV
DPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILEQRESLPIYKL
KEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRV
SEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYAIIMLDEAHER
TIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTK
EPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIIL
PVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTG
IDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVL
SLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC
KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYN
SWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSG
FFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDP
RWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttccggttaaaacggaaaaggaaattgcttttacatccaatatgtctgccgtcg
tcaacgtttgttgaacaaaaacaagactcgtggaaaatggcagacggcggagttgacgag
ttatcgcagctggaatatctgtccttggtgtcgaaggtctgcacggagctcgacaaccat
ctgggaattaatgacaaagatttagccgagtttgtcatcagtcttgctgaaaaacagccg
agcttcgatggattcaaagcacttttactcgaaaatggagccgaattcactgattctctc
atcagcaacttgctcagactcatccagacgatgcgacctccttctaaggcatcgacaagt
aaagcatctgatgtttcaatcaagccaaaaagcgagaaagacaggttgaaggagttgttt
cctgctctgtgtaaacccaacgatccatcaccaaagcggattctggatgaagacgatgtg
aaagtcgctgctgatgcgatgaaggaactagagatgtttatgcccagcgtcagcggggca
gactccaaagtcagcaagagcaagtcagaaaaaagcaggcatcgcagccgaagtagagaa
cgagagaggcacagagacagggatcgggacagagacagggaccggggaggagacaggaag
aggcggcaccattcccgatcgcgttccagatccaggtcacgctcccgggaccggcacagg
gacagggacagagatcgggacagagatcgtggtaaaagaaaggacaagtcttcccgctgg
tctgatcgttcacccagccccaagaaagacctggataaagactctgatcgctggaaagac
aaacacgtggaccggcctcctcccgaggagccttctgtcggcgacatttacaatggcaaa
gtgaccagcatcatgcagtttgggtgctttgttcagctggagggactgagaaaacgatgg
gagggtttggtccacatttctgagctgcgcagagagggtcgcgttgcgaacgtggcggac
gtcgtcagcaagggccaacgagtgaaagtaaaggtgctgtcgttcaccggctccaagacg
agcctcagtatgaaggatgtggaccaggacacaggagaagatctaaaccccaacaggaga
aggaatatgggcccagaaggaggcgaggacgtctccatgaggaaccccgacaggcctagc
aacctgaacctgggtcacgcccccgagctggagcaggacgacacgctggagcgcaagagg
ctcaccaagatctctgacccggagaagtgggagatcaaacagatgatcgctgcaaacgtg
ttgtccaaagaagagttcccagatttcgatgacgagacgggaatcctccctaaggtggac
gatgaagaggatgaggacctggagatcgagcttgttgaagaggaaccaccgtttttgagg
ggacacaccaaacagagcatggacatgagccccgtcaagatcgtcaagaatccagacggc
tcactgtcgcaggcggccatgatgcaaagcgctctggctaaggagaggcgggagctaaag
caggcggctcgagaggcagagatggactccatccccatggggctgaacaaacactgggtc
gacccgctgccagacgtggacggcaggcagatcgctgctaacatgaggggaatcggaatg
atgcccaatgacattccagaatggaagaaacatgcttttggagggaacaaggcctcgtac
ggaaagaagacccagttgtccatcttggagcagagggagagtctgcccatctataaacta
aaggagcagctcattcaggctgttcacgacaaccagatcctgatcgtcatcggagagacg
ggctccgggaagaccacccagatcactcagtacctggcggaggcgggttacaccacccgg
ggcaaaatcggctgtacgcagccgcgacgtgtcgccgccatgtcggtggccaagcgagtc
tctgaggagtacggttgctgtctgggacaggaggtgggttacaccatccgattcgaggac
tgcaccagccccgagacggtgatcaagtacatgacagacggtatgttgctgagggagtgt
ttgatcgactccgagttgggccagtacgccataatcatgctggacgaagctcacgagaga
accatccacactgatgtgctgttcggtctcctcaagaagacggtgcagaagcgcacagac
atgaagctgatcgtaacctcggccacgctggacgccgtgaagttctcccagtatttctac
gaggcccccatcttcaccatcccgggcagaacgtatccagtggaggttctttacaccaaa
gaacctgagacggactacctggacgccagcctcatcaccgtcatgcagatccatctgacc
gagcctccaggcgacatcctggtctttttaaccggtcaggaagagatcgacaccgcctgt
gagattctctacgagaggatgaagtctcttggacccgatgtccctgaactcatcattctc
cctgtgtattctgctctgcccagcgagatgcagaccagaatctttgacccggctccccca
ggaagcagaaaggttgtcattgccaccaacatcgcggagacctctctgaccatcgacggg
atctactacgtggtggacccgggcttcgtcaagcagaaggtctacaactccaagaccggc
atcgatcagctggtggtgactcccatctcccaggcccaggccaagcagagggcggggcgc
gccggcaggacgggtcctgggaaatgttacaggctgtacacggagagagcctatagagac
gagatgttgaccaccaacgttcctgagatccagaggactaacttggccagcactgtgctg
tcgctaaaggctatgggcatcaacgacctcctctcctttgacttcatggatgctcctccc
atggagactctgatcacagccatggagcagctttacactctaggagctctggatgacgag
ggcttgctcacacgcctgggtagaaggatggcggagtttcctctggagcccatgctgtgc
aagatgctgatcatgtccgtccacctgggctgcagtgaagagatgctgaccattgtttcg
atgttgtctgttcagaacgtcttctacaggcccaaggacaagcaggccctggctgaccag
aagaaggctaagttccaccagcctgagggcgaccacctcactctgctggccgtttacaac
tcctggaagaacaacaagttctccaacccctggtgctacgagaacttcatccaggctcgc
tccctgcgccgagcccaggatattcgcaaacagatgctggggattatggacagacataaa
ctggacgtggtgtcttgcggcaaagccacggtgcgggtccagaaggccatctgcagcggt
ttcttcaggaacgctgccaagaaggatccccaggagggctacaggaccctcatagaccag
caagttgtttacatccacccctcaagtgccctgttcaacagacagcctgagtgggtcgtg
taccatgagctggtgctgaccaccaaggagtacatgagggaggtgaccaccatcgatccg
cgctggctcgtagaattcgcgcccgccttcttcaaagtctctgatcccactcgcctcagc
aagcagaagaagcagcagcgcctcgagccgctgtacaatcgatacgaggagccgaacgcc
tggagaatctcgcgcgccttcagacgccgctga
DBGET
integrated database retrieval system
