KEGG   Poecilia mexicana (shortfin molly): 106913905
Entry
106913905         CDS       T08022                                 
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03082  ATP-dependent chromatin remodeling
pmei03083  Polycomb repressive complex
pmei04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106913905
   03083 Polycomb repressive complex
    106913905
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    106913905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmei03036]
    106913905
Chromosome and associated proteins [BR:pmei03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     106913905
  Histone modification proteins
   HAT complexes
    HATB complex
     106913905
   HDAC complexes
    Sin3A-HDAC complex
     106913905
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     106913905
    PRC2.2
     106913905
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     106913905
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106913905
  Chromatin remodeling factors
   NuRD complex
    106913905
   NuRF complex
    106913905
   NuRF complex (fruit fly)
    106913905
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 106913905
NCBI-ProteinID: XP_014835830
Ensembl: ENSPMEG00000006199
UniProt: A0A3B3Y9U4
LinkDB
Position
Unknown
AA seq 424 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggccgataaagacgctgcatttgatgatgccgtggaggaaagggtgatcaatgaagag
tacaagatctggaagaagaacacccctttcctctatgatctggtcatgactcacgccctg
gagtggcccagcctgaccgctcagtggctgccagatgtcaccagacccgagggaaaggac
tacagtgtgcacagactggttttggggacgcacacctctgacgagcagaatcaccttgtt
attgccagtgttcagcttccaaatgatgatgcccagtttgatgcttcacactatgacagt
gagaaaggagagtttggaggctttggctctgttagtggaaaaatagagattgaaatcaag
atcaaccatgagggagaagtgaacagagcgcgctatatgccccagaacccctgcattatt
gccaccaaaacccccaccagtgatgtgctggtctttgactacacaaaacacccctccaaa
cctgatccttctggagaatgcaccccagacctgcgactcaggggacaccagaaggaaggc
tacggcctctcctggaacccaaacctcagcggatgcctcctcagtgcttctgatgaccat
actatatgtctctgggatatcagcacggtgccaaaggaggggaagatcgtagatgccaaa
acaatcttcacaggccacactgctgtggtggaggacgtctcctggcatcttctccacgaa
tccctcttcggatctgtggcagacgaccagaaactcatgatctgggacacacggtcaaac
aatacctccaagcccagccatgcagtggacgctcacactgctgaagtcaactgcctgtct
tttaatccctacagtgagttcattctggccactggctctgctgacaagactgtggccctt
tgggacttgaggaacctgaaactgaaactccattcatttgagtctcacaaggatgagatc
ttccaggttcagtggtctcctcataacgagacgatcctggcctccagcggcaccgacagg
cggctcaacgtctgggacctgagcaagatcggagaggagcagtcgccagaggacgctgag
gatggccctcccgagctgctgttcatccatggcggacacacagctaagatctccgacttt
tcctggaaccccaatgagccgtgggtcatctgttcggtgtcggaggacaacatcatgcaa
gtgtggcagatggctgaaaacatctacaacgatgaagacccagagggcgctgcagattca
gaggtccaggcatga

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