Poecilia mexicana (shortfin molly): 106914296
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Entry
106914296 CDS
T08022
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04136
Autophagy - other
pmei04140
Autophagy - animal
pmei04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106914296 (atg16l1)
04136 Autophagy - other
106914296 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106914296 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106914296 (atg16l1)
03029 Mitochondrial biogenesis [BR:
pmei03029
]
106914296 (atg16l1)
Membrane trafficking [BR:
pmei04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
106914296 (atg16l1)
Others
Specific organelles associated proteins
Auto phagosome
106914296 (atg16l1)
Mitochondrial biogenesis [BR:
pmei03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106914296 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
eIF2A
Tricorn_2nd
Beta-prop_ACSF4
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_VPS8
HALZ
Beta-prop_DCAF12
FKBP15
HEF_HK
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
106914296
NCBI-ProteinID:
XP_014836485
Ensembl:
ENSPMEG00000005792
UniProt:
A0A3B3WNT9
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MAERRADCSWKRHISDQLKLRDRVQRHTFEEIVQQYNRLLEKSDLQAVLTERYQIEKYDV
QRGHEASSLDASRSDSLHQEMSQMRIRHQEELTELHKKRGELAQTVIELNNQIQQKDREI
QSNEARMLEYQQQIASLEGDCRDLRNSLQELEMANQTLKDEYDALQITFSALEEKLRKTS
EDNQELVSRWMAEKALEANRLNAENEKDTRRRQAKLQKDLADAAKEPLPIEQDDDIEVLA
EDGGKGAGETSPNRPISRTASRKTSQQPQGGLLDSISNIFGRRRSANSFGTSPETTEPPS
GGCAEVRVPTTALHVFEAHDGEVNTVRFSPGSRLLATGGMDRRVKLWEVVAGRCEAKGAL
TGSNAGITSIDFDSAGSYLLAASNDFASRIWTMDDYRLRHTLTGHSGKVLSARFLLDNAR
IVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIV
REMELLGRVTSLDLNHDRSELLTCSRDDVLKIIDLRSNAIRQTFSAQGFKCGADWTRVTF
SPDGSYVAGGSADGALYVWNVLTGKLDRTLDRNHSSAINSVSWSPSGTYVASVEKGSRAI
LWSDM
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggccgactgcagctggaagagacacatctcagaccagctgaagctc
agggacagagttcagagacacaccttcgaggagatcgtccagcagtacaatcgtctcttg
gagaagtctgacctgcaggccgtcctcactgagagataccagatagagaagtatgacgtt
cagagaggacatgaggccagctccctggacgcatcgcgcagcgactctttgcaccaggaa
atgtcccagatgaggattcgccaccaggaggagctgaccgagctgcacaagaaacgaggc
gagctggctcagactgtgatcgaactcaacaaccaaatccagcaaaaggatcgagagatc
cagagcaacgaggccaggatgttggaataccagcagcagatcgccagcctggagggagac
tgccgggatctaaggaacagcctgcaggagctggaaatggccaatcagacgctgaaggat
gagtacgacgcgctgcagatcaccttctccgccctggaggagaagctgaggaagacgtcg
gaggacaaccaggagctggtgtcccgctggatggccgagaaggccctggaggccaaccgg
cttaacgccgagaacgagaaggacaccagacgtcgacaggccaaactgcagaaggacctg
gcggacgccgccaaggagccgctgccaatcgaacaggacgacgacattgaggtactggct
gaggacggagggaagggagccggagaaacgtcaccaaaccgaccaatcagcaggacggcg
agcaggaaaacgtcccagcagcctcagggcgggctcctcgactccatctccaacatcttt
ggcaggcgtcggtcggcgaactccttcggcacatctccggaaaccaccgagccgccgtcg
ggaggctgcgcggaggtccgggtgccgaccacggcgctgcacgtctttgaagctcacgat
ggagaggtgaacaccgtccggttcagccccggctcccgtctcctagcaaccggggggatg
gaccgcagggtgaagctgtgggaggtggtggcaggtcgctgtgaggctaaaggagctctg
accggcagcaacgcaggaatcaccagcatcgacttcgacagcgctggctcctacctgctc
gctgcgtccaacgacttcgccagtcgaatctggactatggacgactacagactgaggcac
accttgaccggtcacagcgggaaggttctgtctgctcgattcctgttggacaacgcccgc
atcgtgtctgggagctacgaccgaacgctcaaactgtgggacctgcgcagcaaagtctgt
atgaagacggtttttgccggctccagctgtaacgacatcgtttgcacggagcagtgcgtc
atgagcggacacttcgataagaaggtccggttctgggacatcagggcggagagcattgtg
cgggagatggagctgctgggccgggtgacgtctctggacctgaaccacgaccgcagcgag
ctgctgacctgctccagagacgacgtgctaaagatcatcgacctgcgcagcaacgccatc
cggcagaccttcagtgcgcaggggttcaaatgtggagccgactggaccagagtcaccttc
agtcctgacggcagctacgtggccggcgggtcagcagatggcgctctctacgtctggaac
gtcctgacggggaaactggaccggactctggaccgaaaccacagctcggccatcaactct
gtgtcctggtcgccgtcgggaacgtacgtcgccagcgtggagaagggcagcagagccatc
ctgtggtctgacatgtga
DBGET
integrated database retrieval system
