KEGG   Poecilia mexicana (shortfin molly): 106914313
Entry
106914313         CDS       T08022                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03020  RNA polymerase
pmei03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106914313 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106914313 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmei03021]
    106914313 (polr2d)
   03400 DNA repair and recombination proteins [BR:pmei03400]
    106914313 (polr2d)
Transcription machinery [BR:pmei03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106914313 (polr2d)
DNA repair and recombination proteins [BR:pmei03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106914313 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 106914313
NCBI-ProteinID: XP_014836520
Ensembl: ENSPMEG00000005160
UniProt: A0A3B3WMD2
LinkDB
Position
Unknown
AA seq 144 aa
MAAGGSSVPPQLGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggccggaggtagttcggttcctccgcagctcggagacgtagaagaagacgcttct
cagcttctgtttcctaaagagttcgagaacgcggagacgctactgaactcggaggtccac
atgctgctggagcaccggaagcagcagaacgagagcgccgaggacgagcaggagctgtcc
gaggtcttcatgaagacgctcaactacacggcccgcttcagccgcttcaagaaccgcgag
accatcaccgccgtgcgcagcctcctcctgcagaagaagctccataagttcgagctggcc
agtttggccaatctgtgtccagaagccgccgaagaggccaaggctctgatccccagtttg
gagggccggtttgaggatgaggagctgcagcagatcctggacgatatccagaccaagagg
agcttccagtactga

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