Poecilia mexicana (shortfin molly): 106914663
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Entry
106914663 CDS
T08022
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein isoform X1
KO
K19538
retinitis pigmentosa 1
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmei03037
]
106914663
04812 Cytoskeleton proteins [BR:
pmei04812
]
106914663
Cilium and associated proteins [BR:
pmei03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
106914663
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
106914663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCX
DUF7406
Motif
Other DBs
NCBI-GeneID:
106914663
NCBI-ProteinID:
XP_014837090
Ensembl:
ENSPMEG00000023616
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MQSVQTGLWDPHPPYKHASPLPAPPTSSSRHAHVTTAAPAKRITFYKSGDSQFGGVRMAI
HKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGTHTIKHLEQLQDGGCYLCSDRRQAKPI
NMDLASKRQGIWYHHSRRPQRPEVSSGTPPGHLNLPHRQRRILLVKNSEPGMRRSIVLSR
RSTRSLRAFLDEVSEVMQFHVRKLYTAEGRRIDSVQSLLTCPGVLVCVGREAFSPMLINF
IRKTSEEKLPGLGSKSPGLGPRIPGNGARSPGAQAIRSPPHGAQSRASEYDEGNESKKNV
NFGLETKKSIIHPRSDSSNRSARFSLSSEKSYGVFSQARPAITNDDIEKRVLVNKDGSLS
VEMRVRFRLQNEETVQWSTQIKKSPSLTNDCCPLSQAQPHYLQQGTSESCSDPDSTSYEG
VDYSSRPLERALLENQCQCCYQRHERQFDLWENPTHKHPPAPPVHSSSHTVMRHTHSSSS
SSSCNSRRLIRCRARVSGSPGGSGSEQSQLVQKEMCLTEQVEKRVEVAQDGDTQVEVCKV
SRCCSRTEVVAIDTNIRPPSGKSVEGEVMMGEDEIRPLSTVSSSSHILQSLKEDQDDEED
DLPPSASQCSHRNEASPTPTPVNQLDEGPSSNISACSVQSLKCQEQEENAGSRALSSALS
CHCGATNPHSTAKPDQTDRVPSSMSQEPKNQASEEEAAAAVDNEEINRGLSGLSHNTGLS
AGSQKSSTSNVCSNCGGCKRANSAMSAQSGLSAKSKCTIEALLQNTAERTTSSMSNKSGA
SVKSHKSGCLSVAKELSTSNKTVAEEGDADKRAQSSLSMKSNASNKSGKAESVLSNKSDK
SKASARSSSSSKQCVKALTPENKEKDELNDIIEKREESGVEDRSASALSATSKLSAKSNK
SHRSTEALEKSTSPRSETGEDAEEIATSQMSGRLSVHSTKSCKCNDNRKAPSPALEVENN
AEEIQPRPESIIEDHLENRSTSPRSCKSDSSAKSHNAVENRSPSATSQRSHTSAKSSQSK
RSNQPKESQNDPNLTLTETNREETDIEHREALESVMSAKSKYSVKSDISSKNPSATNAVK
IKAPEGTDEAKEGEPDSDVACIETSQAGDNEDDPTIKGTYTIDPDGQTLSPKRKPSSRSH
SPSSRCSQSPVQKLSPSSGAGEQRGPSSLSVHSKTSSKVSRSRCRCETASPVEKENKEED
RNSEGAQSCSSKRQRKESGCTDQPLSHNGSGSISLGLQGDQETAESDCDKSSVSFCNGER
KSPSLHSLPVVDIPTIETPREGEKGDEEGGEQPTERPASATTVQSSRSHKSCCNCSVKSA
AQSKGKSSSPIPTSIDKAESVKSAATTNARKMDTPKSRSSSAMSGTQVCGKSPSDTTSNL
NTSTDAENQKTSRPGSTTKGEEDKTSVHSQSPCGPRPESTALVQTETKRISEERNVALGS
VKSGDHKSHKGSECGSTKVSISRQKETPPKSTSPCSLHSPGPASKVKPGSGSTLSHSLSA
ADLLKETLAAARQQDCQSKASKTSEKAHSEKSGRSQRSRSRKDWEDVMEMTPECLPNASP
NEVVSDWLRSIPANTSMLTLDNELNDEETEEGAKEMEETPTEEVGTGEMSPEDEKVELEE
KMEPQEEEKKDEAEGDGVGPTLGDTAEISSRSRNWHSSAAVMKVLLSSSLGRCRSMPEVS
PVYGRRLSTSARGLLDCLAQLQLIEPAVSSHEQKDRKQQYDEIMAILQSLWLTEPHNINV
KDTKDGGTDQVTPPRSSSGVGMSSGSGGSGGGKSNGNQGEDEPPRKETESLQEEEAAEKV
VEEDNGNAAAKQVEAETEVEETNQTDTAEEVMKSEEQSTLPPDSSKATDNPSLSEKSSPN
DSSKSERDTQEDSSSGTPPSAPRPPLSKRLSQDPDPVWVLHLLKKLEKQFMNHYIEAMEE
FKVRWDLDDSLILDTMISELREEVSRRIQSSIEREMRKIQSRAGKVGRSPWPPQLANMSR
DSTMTEKRRRMLKVMKNQSVKTAESLTDEEMVADFSDQRSDDEYCPCEACVRKKMAARPF
KKNPLAAEAPVMMEFDLLKILQLKKSPLPPSSVPKPVEEERAAADEEGRSLEVVEEEEEE
ETKEDIKADVVLEETIPEEDEEEEEEEQEKDEESRDREQEREENSAEDEELETDEQQETS
ENAEEDDGLCTCQSESNKEEEGEAGETSNYTDEGEAGTGEEEEEESDRETVKEATTGDKE
AESEDDTSATNGEPTLAEEMMRGNVGTSAEEEDEGTGEEEEKQEESEEQEGEASEEERNS
PQSQVVIPAACVTEGEEADAEDSDDSKRHGDASADESAPEEAASSGEEEAKSSREDEQED
AVEEFRLEQESEAAKGKNEDGTLLHQFTRTSVESQPGSMEDVDMDLPSNSKVVDINGHKT
KE
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggtccagacagggttgtgggacccccaccccccgtataaacatgcctcgcct
ctgcctgcaccccctacttccagttcgcgccacgcccatgtgaccacagccgccccggcc
aagcggataactttttacaaaagcggcgacagccagtttgggggcgtccggatggccatc
cacaagcgcagcttcaaatgctttgatgccctgctggacgacctttcccaaaaggtgccc
ctcccgtttggagtgcggactgtgaccactccccgaggtacacacaccattaaacacctg
gagcagctccaagatggtggctgctacctctgctctgaccggcgccaggctaagcccatt
aacatggacctggccagcaaacgccaaggcatctggtaccatcacagccggaggcctcaa
cgccccgaagtgtcctctgggactccacctggacatttgaatttgcctcacaggcagagg
cggattctgctggtgaagaacagcgagccggggatgaggcggagcattgtgctgagcagg
agatccaccaggagtctaagagctttcctagacgaagtgtccgaggttatgcagtttcat
gttcgcaagctgtacactgcagaaggacgcaggattgacagcgtgcaaagcttgttgact
tgtcctggtgttctggtgtgcgttggccgggaagccttcagccctatgctcataaacttc
attaggaagacttcagaggaaaagctacctggtctggggagcaagtctccaggccttggt
ccaaggattcctggtaacggtgccagatctcctggagcacaagccataaggtccccacct
catggagctcagtccagagccagtgaatatgatgaaggaaatgaaagcaagaaaaatgtt
aactttggtctggagactaagaagagcatcatccaccctcgatctgattcttcaaatcgg
tctgcccgcttctctttgtcgtctgaaaagtcatacggcgtcttctcccaagcaaggcca
gctataacgaatgacgacattgaaaagcgtgtccttgtcaataaagatggcagcctgtca
gtagagatgagggtgcgttttcgcctccaaaatgaggagaccgtccagtggtccacacag
attaaaaaatcgccctctctcaccaatgattgttgccccctgagccaagctcaaccacat
tacttgcagcaaggcacatcagaaagctgttctgaccctgattcaacatcctatgagggt
gtggattattccagccggcctctggagcgtgcgttgttggagaaccaatgtcagtgttgc
tatcagagacatgaacggcagtttgatttgtgggaaaaccctacgcacaaacaccctcct
gccccacctgttcattcatcaagtcacactgtgatgagacacacacactcgtcaagctcc
tcctcttcatgcaattccagaagactgattcggtgtcgggcacgggtctctgggtctcca
ggtggctccggctcagagcagagccagttggtacagaaagagatgtgtctaacagagcag
gtggagaaaagagtagaagtggctcaagatggggacactcaagttgaggtctgcaaagtt
agccgatgctgcagtcggacagaggtggttgccatagataccaacattcgaccacccagc
ggaaagtcagtggagggcgaggtgatgatgggggaagatgaaatccgaccactgtctaca
gtcagcagctcttcgcatattttacagtcactgaaagaagaccaggatgatgaggaggat
gatctgccacccagcgcttcccagtgctctcacaggaatgaggcgtcccccactcctacc
ccagtaaatcaattggatgaaggtccatcgagcaacatctccgcctgttcagtccagtcg
ctcaaatgccaggagcaggaagaaaatgcaggaagcagggctttgtcttcagctttatcc
tgtcactgtggagcaactaaccctcactcaacagctaaaccagatcagacggatcgagtc
cccagttcgatgtcccaggaacccaagaaccaagcatctgaagaagaagcggcagctgct
gttgacaatgaagaaattaacaggggtcttagtggcttatcccataacacaggactttca
gcaggttctcagaaatcatcgacatccaatgtttgctcaaactgtggaggctgcaaacgt
gcaaacagtgcaatgtcagctcagtctggtttgtctgctaagtccaagtgcacaatcgaa
gctctacttcagaacactgcagaacgaacaaccagttccatgtcaaataaatctggtgcc
tcagtcaagtcccataaatctggctgcttatcagttgctaaagagctgtccacgtcaaac
aaaacagttgcagaagaaggcgatgcagacaaaagagctcagagtagcctctctatgaag
tcaaacgcgtctaacaagtctggaaaggccgaaagtgtcctgtcgaataaatcagataaa
tccaaggcttcagcaagatcaagctcatcttctaagcaatgtgtgaaagctctaactcca
gaaaacaaggaaaaagatgaactgaatgacataatagaaaagagagaagaatcaggagtg
gaggacagatcagcaagtgcactgtcagcaacatcaaaactgtctgccaagtctaacaaa
tcccataggtccactgaagctttggaaaaatccacttcccccaggtcagaaactggggag
gatgcagaagaaatcgcaaccagtcaaatgtctggaagattatctgttcattccacaaaa
tcctgcaagtgtaatgataacaggaaagcaccgtctccagccttagaagtggaaaacaat
gcagaagaaatccagcccaggccagaaagcataatagaagatcatttagaaaacagatca
accagtcccaggtcttgtaaatcagattcttctgcaaaatcacacaatgcagttgaaaac
agatccccgagtgctacttcacaaagatcacacacctctgctaagtcctcacagtcaaag
aggtcaaaccaaccaaaagagtctcagaatgaccccaatcttactttgactgagacaaac
cgggaagagaccgacattgaacatcgtgaggctttggagagcgtcatgtctgcaaaatca
aaatattcagtcaaatctgacatttctagtaaaaatccctcagctacaaatgctgtcaaa
atcaaagcaccagaaggaactgatgaggcaaaagaaggagaacctgattctgatgttgct
tgtattgaaacatcacaagccggtgacaacgaggatgatcctacaataaaaggcacatat
actatagaccctgatggccaaacactctcaccaaaaagaaaaccttcatcccgctcacat
tccccctcctccagatgttctcaatcccctgtgcaaaagttgtcaccgagctccggtgct
ggtgagcaaagagggcccagttcgttgtctgttcactccaaaacctctagcaaagtaagc
agatccaggtgtcgctgtgaaacggcctcacccgttgaaaaggaaaataaagaagaagac
agaaatagtgagggagctcagtcttgctcctcaaaaagacaaaggaaagaatcaggatgc
acggatcaacctttgagtcataacggatcaggttcgatatctttagggctgcaaggggat
caggaaactgctgaatcagactgtgacaaatctagtgtctctttttgcaacggcgagagg
aaaagcccttctctccacagtcttccagtggttgatatcccaacaattgaaacacccaga
gaaggtgaaaagggtgatgaagagggtggggaacaacccaccgaaagaccagccagtgca
acgacagttcaaagcagcaggtctcataaatcctgttgtaactgtagtgtcaaatcagca
gctcagtctaaggggaaaagcagcagtcctatccccacaagcatagacaaagcagaaagc
gtgaagtctgctgcaacaacaaatgctcgcaaaatggacaccccaaagagcaggagctca
tctgcaatgtcaggaacacaagtttgtgggaaatccccttctgatacgacttctaatctt
aatacaagtactgatgctgaaaaccagaaaaccagtagaccaggaagtacgaccaaagga
gaagaagacaagacaagtgtccactcccaaagtccctgtggtcctaggccggagtcaaca
gctttggtgcagacagagacaaaaagaatttcagaggagaggaatgtggctttggggtca
gtcaaatctggagatcacaaatcccacaaaggaagtgagtgtggaagtaccaaagtttct
atttccaggcaaaaagaaactcctcccaaatcaacaagtccttgttccttacacagcccc
ggaccagccagtaaagtcaaaccaggtagcggaagcaccttgtctcactctctgtctgct
gccgacctactgaaggaaacgttggctgctgctcgccagcaggactgccaatcaaaagcc
agtaaaaccagtgaaaaggcccacagcgagaagagtgggaggtctcagaggagcagaagt
cgaaaggattgggaagacgtgatggaaatgacacctgagtgtttgcccaacgcgtctccc
aatgaagttgttagcgactggctgcggagcatccctgctaatactagcatgctcacactg
gataacgagctaaatgatgaagaaactgaggagggggcaaaggaaatggaggagacacca
acagaagaggtaggaacaggggagatgagtccggaggacgagaaggtggaactggaggag
aaaatggagccacaagaggaggaaaagaaggatgaagccgaaggtgatggagtcggtccg
actttaggcgatacagcggagatttcttctcgttccaggaactggcattcatctgcagcc
gtgatgaaagtcctcctgagctcgtctctgggtcgatgtcggagcatgcctgaggtgtct
ccagtttacggccgcagactgagcacatcggccagggggcttttggactgcttggcccag
ctgcagctcattgagcctgcagtcagcagtcatgaacagaaggaccgcaagcagcagtac
gacgagattatggccattcttcagtccctgtggctcaccgagccgcacaacatcaacgtc
aaggacactaaggacggcggcacagaccaggtgactccaccaaggtcctcgtctggagtg
ggaatgagcagtggctcgggcggatcaggtggagggaaaagcaatgggaaccaaggagaa
gatgaaccacccaggaaagaaaccgaatctctgcaggaggaagaggcggcggagaaggtt
gttgaagaggacaatggaaatgcagcagccaaacaagtcgaagcagagacagaagttgag
gaaacaaaccaaacagacacagctgaggaagtgatgaagagtgaagagcaaagtactctt
cctcctgacagctcaaaagccactgacaacccttcattatcggaaaagagctctcccaac
gacagctccaaatctgaaagagacacgcaggaggactccagctcagggactcctccctct
gctcctcggccacccttatccaaacgactatcccaagatcccgatccggtttgggttctt
cacctcctaaagaagctggaaaagcagttcatgaaccactacattgaggccatggaggag
tttaaggtccgctgggacctggacgacagcctcatcctggacaccatgatctctgagttg
agggaagaggtgagccgccgcatccagagcagcatcgagcgggagatgaggaagatccag
agccgagccgggaaagtggggaggtctccttggccgccgcagctagctaacatgtctcgg
gattccaccatgacggagaagaggcggcgcatgctgaaggtgatgaagaaccagtcagtg
aaaaccgcagagtctctcactgatgaggaaatggtggccgatttcagtgaccagcgaagc
gacgacgagtactgcccctgcgaagcttgtgtccgcaagaaaatggccgcccggcctttc
aagaagaacccgctggcggccgaagctcctgtgatgatggagttcgacctccttaagatc
cttcagctcaagaaaagcccattgcctccttcttctgtgccgaaacctgttgaggaggaa
cgggcagctgcagacgaagaaggaaggagtctagaggtagtcgaagaagaagaggaggaa
gaaaccaaagaggatataaaagctgatgttgtgttagaggagacaataccagaggaagac
gaggaggaagaggaggaagagcaggaaaaagatgaggagagtagagatagagaacaggaa
agagaggagaatagtgctgaagatgaggagctggaaacagatgagcaacaagagacatca
gaaaatgcagaggaggatgatggactgtgcacttgtcagtctgagagcaacaaagaagaa
gagggagaagcgggggaaacgagcaactacacagatgaaggagaggcaggaacgggagaa
gaggaggaggaagagagcgatagagagacggtgaaggaggcaacaacaggcgacaaggag
gcagaatcagaggatgacacatcggcaactaatggagagccgacgctggcggaggagatg
atgcggggaaacgtcggcacatctgcagaggaggaagacgaaggcacaggagaggaagag
gaaaaacaagaagagagtgaggagcaggaaggagaggcttctgaggaggagagaaattca
ccgcagagccaagttgtgattcccgctgcatgcgtgacggagggcgaagaggcagacgcc
gaagactctgacgacagcaagcgtcacggcgacgccagcgctgacgaatcagcaccggag
gaggccgccagctctggggaagaggaagcgaaaagcagcagagaagatgaacaggaagat
gcagtggaggagtttagacttgagcaagaaagtgaggcggccaaaggcaaaaatgaggac
gggactctgctccaccagttcaccagaacctcggtggagtcccagcctggatcgatggaa
gacgtggacatggatttaccttcaaactcgaaagtggtcgacataaatggccataaaacc
aaagagtga
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integrated database retrieval system
