Poecilia mexicana (shortfin molly): 106914894
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Entry
106914894 CDS
T08022
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106914894 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmei04812
]
106914894 (spast)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
106914894 (spast)
Membrane trafficking [BR:
pmei04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106914894 (spast)
Cytoskeleton proteins [BR:
pmei04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
106914894 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
MIT
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_24
AAA_14
IstB_IS21
NPHP3_N
DUF815
AAA_2
nSTAND3
AAA_33
Motif
Other DBs
NCBI-GeneID:
106914894
NCBI-ProteinID:
XP_014837563
Ensembl:
ENSPMEG00000013412
UniProt:
A0A3B3YLW5
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSAKTNAPKHKDSGELIKNYHKQAFEHISKALRIDEDDNGEKEEAVQWYKKGIAELERGI
AVEITGTAGEQYDRSKRLRDKMKANLTMAKDRLALLEATLASKSKSPRGSNSNLANSHPK
SKSQPSVSSTVRPSTSVRPPTRPIEPKVTPRMGRAQNGRPPAVRQPPKRDMKNFKNVDSK
LANLILNEIVDRGASVSFEDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGP
PGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVIFIDEV
DSLLCERREGEHDASRRLKTEFLVEFDGVQSGGEERVLVMGATNRPQELDEAVLRRFAKR
VYVALPDEKTRCTLLKNLLGKHGNPLSTSELSQLAKATAGYSGSDLTSLAKDAALGPIRE
LGPEHVRSMSASEMRNIKMKDFEESLKRIKPTVSSATLNMYTKWNKDFGDTSAF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaaacaaacgctcctaagcacaaagacagcggagaacttattaaaaactac
cacaagcaggcgtttgagcatatatcgaaggcactgaggatcgatgaagatgacaacgga
gagaaggaggaagccgtgcagtggtacaagaaaggaatagctgagctagagagaggcatt
gctgtggagatcacagggacagcaggagagcaatatgatcgatcgaagagactgcgagat
aaaatgaaggccaatctcaccatggcaaaagaccgacttgctttgttagaggccacatta
gcatctaagagtaaaagtcctcgtggctcaaactcaaatcttgctaattcacatccaaag
tccaaaagccagccttcagtgtcctccaccgtcaggccttcaacttctgtcagaccccca
acaagacccattgaaccaaaggtgacccctcgcatgggaagagcgcaaaatggaagacct
cctgctgtgagacagcctccgaagagggatatgaaaaacttcaagaatgtggactctaaa
ctggccaacttgatcctgaatgagatcgtcgacaggggggcttctgtctcttttgaagac
atcgctggacaagatctggctaaacaagcactccaagaaatcgtcatccttccttcttta
agaccagagctgtttaccggactgagggcacctgcacgtggtttgcttttattcggccca
cctggaaatgggaaaaccatgctggccaaagcagttgctgcagagtctaatgccaccttc
ttcaacataagtgctgccagtctgacgtctaaatatgtgggtgaaggtgagaagctcgtc
agagcgctgtttgcagttgcaagggaattgcagccttccgtcatctttattgacgaagtg
gacagcttgctgtgtgagaggagggaaggggaacacgacgcctcccgtcgtttaaaaacg
gagttcctcgtcgagtttgacggggtgcagtcaggcggggaggagagggttctggtgatg
ggagcaactaacaggcctcaggagctcgatgaagccgtcttaaggcgctttgcaaaaaga
gtttatgtggcgctccccgacgagaagacacgatgcacgctgcttaaaaatcttctggga
aaacacgggaatccactaagcaccagtgagctctcccagctcgcaaaagcaactgcagga
tactcaggaagcgatctgacgtcattagccaaagatgcggcactgggcccaattagagag
ttggggcctgaacacgtccgcagcatgtctgccagtgagatgcgcaacatcaagatgaaa
gactttgaggaatctctgaaacgcatcaagcccactgttagttcggcaactctaaatatg
tacaccaagtggaacaaagattttggggatacatctgctttttga
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